Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1363 ATGATTCAAAGGACCACACGTTCACGGATCAAACAAACAACGAACAAAGCCTACAAGAGCTGGGGATGCGATCCCATTTCCTGGCCCCATTCGAATGAAGATGACGATGCTGCTGGCGTCTTTCTCTCTGTCTCTTCCAATGCTGTCCTCACAATTATTATTCAATTGTTGTATTTGTTGGTTGAGCCGAGGATGCGAGAGTCCAGAAGTGAAAAAGCTCCTCTCTTGGAAAACGGAGAAGGAAGGAAGATAGGTGATACCTCGGCTGATCAGCCGACAGACCTTGAACATGGTGATGCTCTACCGGCTGCAAATGTGGGAGTATGTCGAGTGCTTTCACTTGCAAAACCTGATGCTGGGAAGTTGGTACTTGCAACAGTGGCTCTGTTGATTGCATCCACCTCAAGTATCTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTTTCAGGAGATATTTCAACACCTGAGAATAAAGCTAAAGCTCTGGATGCTGTAAAGAGCACCATACTGTATATCTTTCTGATTGTTGTCGTGGGTTCAGTTTCCACAGCACTGCGAGCATGGCTTTTCTCTTCTGCCAGTGAAAGGGTTGTTGCACGGTTGAGAAAAAGATTGTTTAGTCACCTCATAAACCAGGAGATAGCCTTCTATGATGTTACTAGAACTGGAGAACTTCTAAGCAGGCTATCTGAAGATACACAGATAATAAAGAATGCCGCAACTACCAATCTATCTGAGGCCTTGAGAAATTTATCAACTGCCTTTATTGGTCTCTCTTTCATGTTTGCAACATCATGGAAGTTAACTTTATTGGCTTTGGCTGTTGTACCTGCTATTTCTGTCGCTGTTCGTAAATTTGGTCGGTTCTTGCGTGAACTTTCTCACAAAACTCAAGCTGCAGCTGCAGTAGCTTCATCGATCGCTGAGGAATCCTTTGGTGCTGTAAGAACAGTGAGATCTTTTGCCCAAGAAGAACATGAAATAGCACGGTATTCTGAGAAAGTTGAAGAAACACTTGGGCTTGGACTTAAACAGGCTAAAGTGGTTGGACTCTTTTCTGGAGGCCTCAATGCAGCATCTACACTGTCAGTTATTGTAGTTGTCATATATGGAGCTAACTTAACAATCAAGGGTGCCATGTCTGTGGGTGATCTTACATCTTTCATTCTTTATAGTCTCACAGTGGGATCTGCTGTATCTGGTCTGTCATCATTGTATACAGTAGTAATGAAAGCTGCAGGTGCTAGCAGACGGGTATTTCAACTTCTGGATCGAGTCTCTTCCATGCCTAAGTCAGGAAACAAGTGCCCTTTGGGTGATCAAGATGGTGAAGTGGAACTAGATGATGTCTGGTTTGCCTATCCATCACGTCCAAGTCATACAATACTCAAGGGAATCACATTGAAACTGCAGCCTGGCTCAAAGGTTGCTCTCGTTGGCCCTAGTGGTGGTGGAAAGACTACTATAGCTAACTTGATTGAAAGATTTTATGACCCAACCAAGGGAAAGATTCTGCTGAATGGGGTTCCTCTGGTAGAAATATCACATGAGCATCTACACAAAAAGATCAGTATAGTGAGTCAGGAACCTACACTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGACTTAATGGCAAAGTTAATCCTGTTGATATAGAAAATGCTGCTAAAATGGCCAATGCACATGAATTTATATCAAAGTTCCCAGATAAATACCAAACACATGTTGGAGAACGTGGGGTACGGCTTTCAGGAGGACAAAAGCAAAGAATAGCTATTGCTAGAGCCCTGCTCATGGACCCAAAAATTCTTCTCCTGGATGAAGCCACTAGTGCCTTGGATGCTGAAAGCGAATACCTAGTACAAGATGCCATGGATTCTCTAATGAAGGGGAGGACAGTTCTAGTTATTGCTCATAGGCTATCTACTGTTAAAAGTGCAGATATTGTAGCAGTTATTTCTGATGGTCAAATAGTTGAAAGTGGCACCCATGATGAACTTCTCAGCAAGAATGGTGTTTATACTTCATTAGTCAGAAGACAACTACAAACAGCAAAAACTGAAATCTAA 2082 0.4246 MIQRTTRSRIKQTTNKAYKSWGCDPISWPHSNEDDDAAGVFLSVSSNAVLTIIIQLLYLLVEPRMRESRSEKAPLLENGEGRKIGDTSADQPTDLEHGDALPAANVGVCRVLSLAKPDAGKLVLATVALLIASTSSILIPKFGGKIIDIVSGDISTPENKAKALDAVKSTILYIFLIVVVGSVSTALRAWLFSSASERVVARLRKRLFSHLINQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWKLTLLALAVVPAISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAVRTVRSFAQEEHEIARYSEKVEETLGLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGAMSVGDLTSFILYSLTVGSAVSGLSSLYTVVMKAAGASRRVFQLLDRVSSMPKSGNKCPLGDQDGEVELDDVWFAYPSRPSHTILKGITLKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLVEISHEHLHKKISIVSQEPTLFNCSIEENIAYGLNGKVNPVDIENAAKMANAHEFISKFPDKYQTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADIVAVISDGQIVESGTHDELLSKNGVYTSLVRRQLQTAKTEI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1363 693 PIRSF ABC_prm/ATPase_B 10 693 - -
Alju13g1363 693 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 123 413 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju13g1363 693 ProSitePatterns ABC transporters family signature. 587 601 IPR017871 GO:0005524|GO:0016887
Alju13g1363 693 Pfam ABC transporter transmembrane region 122 397 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju13g1363 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 447 684 IPR003439 GO:0005524
Alju13g1363 693 Pfam ABC transporter 465 615 IPR003439 GO:0005524
Alju13g1363 693 MobiDBLite consensus disorder prediction 70 96 - -
Alju13g1363 693 SMART AAA_5 474 668 IPR003593 GO:0016887
Alju13g1363 693 CDD ABC_6TM_AtABCB27_like 125 421 - -
Alju13g1363 693 MobiDBLite consensus disorder prediction 70 93 - -
Alju13g1363 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 685 IPR027417 -
Alju13g1363 693 CDD ABC_MTABC3_MDL1_MDL2 447 685 - -
Alju13g1363 693 Gene3D ABC transporter type 1, transmembrane domain 172 444 IPR036640 GO:0005524|GO:0016020
Alju13g1363 693 FunFam ABC transporter B family member 25 174 444 - -
Alju13g1363 693 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 98 690 IPR039421 -
Alju13g1363 693 SUPERFAMILY ABC transporter transmembrane region 110 426 IPR036640 GO:0005524|GO:0016020
Alju13g1363 693 Gene3D - 445 689 IPR027417 -
Alju13g1363 693 FunFam ABC transporter B family member 25 445 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1363 Alju-ChrAlju13 32358688 32364780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1363 139 685 Calmodulin-binding Proteins AT2G36910 39.099 1.71e-106 350