Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1358 ATGGAGTCTTGGAGTTATGATTCTGAAGAGAAAGGGTTTGTGTCTAGCGATACGCTCTCACCTCCTAATACACTTTCCAGAAGTAAAGGTTCCATCTTGGGATGGGAATTGAAGAGCCCATCTGGTATTTCCAGCGATATGTTGTCCTCGGATCAACCAAACGTAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGGAAACAATTGCCCGATGATCCAATTAGCAGTGTGTCCAACAGAAAGCTCGAAGGTGGTCTTTTTATGGCTGCTGCTGCCCCAATTGCGATTTCTGGAGTTGACGACTCAAATTCGAAGCCTTCTAACTCCGTGGTTGAATCTAACGGTCGAGATTCGCTCATTGACTTGAAGCTGGGACGATTTGGCGATCCCAGAGAAGCCGTGGATTCAGCATTCTCCAAAGGAACCCTTCTTTTGTCTTCTTCAGAATCATCGGCTCCGACCAAGAGAATACGAGGTTCGGGTGTTCATTCACAAACAGCGCACTGTCAAGTTTATGGATGTAATAAAGATCTGAGCGGTTCTAAAGACTACCACAAGAGGCACAAAGTTTGCGAGGTTCATTCCAAAACTGCCAAAGTTATAGTCAACGGCATCGAGCAGAGATTTTGTCAGCAATGTAGTAGGTTTCACTTGCTGGCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAATGAGCGCCGGCGAAAGCCACAAGTTGGTATTCACTCTGGAAAGGCTGGAAGATTGCTTCATTCATATAGTGATAGCAGATTCCAGAGCACCATGGTTACAACTGCATCTTTTATCTGCCAAGAGATACTTCCGATGGGGACTTTGCGCTCTGATAAATATGGAACAAATGACTGGTGGAGGCCGATAAAGAACGAAGATGGGACTGATTTTAGGCATCCTCCTGCTGTTCCTATTACAAATGGACACCCTCAGTCAAGATCTCTATTCCCTCCATATACCGAAAGACAGTTTCCTTTTCTTCATGAGAATGTCGCCACGTCCAGTACAGGAAGCATCTTTTGTGAGAACAACAGTCAGTATCCTCCGCACCCTCCTGCCATGGGTCCAAATTCTGGGGCACAATCTTTGTTCCAAGACACTTCCTTAAGAAGTGAGGACTTCAATGTTTATGATACTACGTCGACAATTCAGGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCACTCATCGGGAATCCCCATGGCTCGCCCCTTGGTCGTTCCAAGTGGTAGCCATTGTAATTACAGCCAGAGTCAGCTCACCGACAAGATCATAGGAATTAGCTCCCAGGCTTCTACTACAAGCGCAGGAGTTTCCAATATGTTTCGATCCGAGATGAATCCTGCTGCCACTGATGGAAGTCATCTTAGTCCCGTACTGATATCAGACAATAGTAATATTCTCCATTTTGAAATGGCAGATGGGATGTTCCAAGGACCTGGTTTTGTTAACATGAAAGATGGTCTTTCCTGTGAAGATGGCCCAACTATTGACTTGCTTCAACTTTCATCACAGCTTCAGCGAGTTGAGCATCAGAGGCAATCCTCATCGCAGGCGAAGCGAGATAATGATTCGACTCTGGATGAGGAAACAAAACAGGGTGGAAGATACCTATGCTAA 1704 0.4572 MESWSYDSEEKGFVSSDTLSPPNTLSRSKGSILGWELKSPSGISSDMLSSDQPNVGNQGFEEMGFPEMLGKQLPDDPISSVSNRKLEGGLFMAAAAPIAISGVDDSNSKPSNSVVESNGRDSLIDLKLGRFGDPREAVDSAFSKGTLLLSSSESSAPTKRIRGSGVHSQTAHCQVYGCNKDLSGSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLHSYSDSRFQSTMVTTASFICQEILPMGTLRSDKYGTNDWWRPIKNEDGTDFRHPPAVPITNGHPQSRSLFPPYTERQFPFLHENVATSSTGSIFCENNSQYPPHPPAMGPNSGAQSLFQDTSLRSEDFNVYDTTSTIQGLSGVSDSGCALSLLSSQSQNSSSHSSGIPMARPLVVPSGSHCNYSQSQLTDKIIGISSQASTTSAGVSNMFRSEMNPAATDGSHLSPVLISDNSNILHFEMADGMFQGPGFVNMKDGLSCEDGPTIDLLQLSSQLQRVEHQRQSSSQAKRDNDSTLDEETKQGGRYLC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1358 567 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 549 IPR044817 GO:0003677
Alju13g1358 567 Pfam SBP domain 173 246 IPR004333 GO:0003677
Alju13g1358 567 ProSiteProfiles Zinc finger SBP-type profile. 170 247 IPR004333 GO:0003677
Alju13g1358 567 MobiDBLite consensus disorder prediction 536 567 - -
Alju13g1358 567 SUPERFAMILY SBT domain 171 251 IPR036893 GO:0003677|GO:0005634
Alju13g1358 567 Gene3D - 163 234 IPR036893 GO:0003677|GO:0005634
Alju13g1358 567 MobiDBLite consensus disorder prediction 8 30 - -
Alju13g1358 567 MobiDBLite consensus disorder prediction 1 31 - -
Alju13g1358 567 MobiDBLite consensus disorder prediction 43 62 - -
Alju13g1358 567 MobiDBLite consensus disorder prediction 43 57 - -
Alju13g1358 567 FunFam Squamosa promoter-binding-like protein 14 164 234 - -
Alju13g1358 567 MobiDBLite consensus disorder prediction 542 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1358 Alju-ChrAlju13 32307213 32310342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1358 124 265 SBP-box Gene Family AT1G69170 60.563 1.79e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju13g1358 SBP 9.6e-32 No_clan