Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1349 ATGGAGCTCCCTCAAGCGCGTTCCTTCGGAACCGAAGCAAGAAAACCAACGCATGACTTTCTGTCACTGTACAGTCATTCAACTGCCCAGCAAGAGCCAAGGCCACCATCTCAAGGAAGTTACCTGAAAACGCATGATTTCTTGCAGCCACTAGAACGTGTTGAGAAGAAAGCAAGCGCCAAAGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCCGCCGCCACCTGCACCACCGCCACAACCATGTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCGTATTTTAGTAATCACAGGGTTCCAAAGCCGGAGGCTTCCCTTTTCACAGTGTCTCAAGCCTGTGACGTAAGTTCAGATAGAAATGAGGAGAATTCTAACTGCAGTTCATATACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGACGTGGGAGAGAAACCTGTTATAGCAGAGTGTGGGGCCAAGGCAGGGCAGTGGTCGATGACTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAGAATAGCTTCAATTCTATCACTTCCACTCAGAAAACTGGGCAGAAGAACCAGAGTTTCATTGATATGATAAATTCTGCCAAGGATTGTTCTCAGGATGAGGATCTAGACAATGAAGAAGCATTCATTTTTAAGAAAGAATCCTCAAATACCCAAAGAGGCGAATTGAGAGTGAAAGTGGATGGGAAAAGTTCTGATCAAAGGCCAAACACACCACGTTCGAAACATTCTGCAACAGAGCAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGAGAGCTTATTCCACATAGTGACCAGAAAAGAGACAAGGCTTCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCGTAAGCACGAAGGTTCATACCAAGTGTGGAATCAAGAGAAAGAAAAATTGACTCCATGGAGGAATAATAGGCCTTCAGAAAGCTATGATGACCAATCTCGGGTAATAAATAGTGGGTCAGGTCCATCTTCAATATTATTGTTCCCTTCAAAGATGGAGGAGGAAAATTTTAGCATCTCCCCAACAGTCTCTGGCGGCATGAAGAATGTAGCTGGTACTAGTTCTGCAACTACATTGAAGGCAATGAATCAACATCCTGGAATAATCAATAAGGCCATGCCAATTCCTAACTCTTCACAGCCAAATTTCTTCAATCCTGGCCAAAGTGGCGGTCCAGGTAGATTGGCGTCTCAGCTCACACACAGGCTAACCTCAGATGCTGAAAACACCATATATAATCCCTTAGGACTGTCTCAGACTCACTCTTCTGCTACAGGGGTGACTGCTGCTAGTGATAAGCTTAAAGAGAAAGATCTCACAATTGAAAGCGGCGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATTTCAGTCCAGATTGAGCTTGGTAAGCAAGCAAACATCAGACCAATTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAACCAAGGGATGAAGCGCTCTAGAGTTTGTAGCATAGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAACCAGAAGTTGA 1713 0.4402 MELPQARSFGTEARKPTHDFLSLYSHSTAQQEPRPPSQGSYLKTHDFLQPLERVEKKASAKEEASDEISSVVQKPPPPAPPPQPCVEHILPGGIGTYSISHISYFSNHRVPKPEASLFTVSQACDVSSDRNEENSNCSSYTGSGFTLWEESAVKKGKTGKENDVGEKPVIAECGAKAGQWSMTERASQSFVKNNQNSFNSITSTQKTGQKNQSFIDMINSAKDCSQDEDLDNEEAFIFKKESSNTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVRKHEGSYQVWNQEKEKLTPWRNNRPSESYDDQSRVINSGSGPSSILLFPSKMEEENFSISPTVSGGMKNVAGTSSATTLKAMNQHPGIINKAMPIPNSSQPNFFNPGQSGGPGRLASQLTHRLTSDAENTIYNPLGLSQTHSSATGVTAASDKLKEKDLTIESGAISISSVYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPIGPTSGVKDEVTSSNQGMKRSRVCSIEETDLAVKKLKTTRS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1349 570 CDD bHLH_AtBIM_like 264 340 - -
Alju13g1349 570 MobiDBLite consensus disorder prediction 21 44 - -
Alju13g1349 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Alju13g1349 570 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 567 IPR044295 GO:0003700|GO:0006351|GO:0046983
Alju13g1349 570 Gene3D - 263 337 IPR036638 GO:0046983
Alju13g1349 570 MobiDBLite consensus disorder prediction 48 68 - -
Alju13g1349 570 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Alju13g1349 570 MobiDBLite consensus disorder prediction 1 85 - -
Alju13g1349 570 Coils Coil 312 332 - -
Alju13g1349 570 SMART finulus 271 321 IPR011598 GO:0046983
Alju13g1349 570 MobiDBLite consensus disorder prediction 530 549 - -
Alju13g1349 570 MobiDBLite consensus disorder prediction 247 280 - -
Alju13g1349 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1349 Alju-ChrAlju13 32217264 32222064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1349 1 525 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.358 1.15e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju13g1349 HLH 2.7e-15 No_clan