Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1345 ATGCAAGCCTTGAAATTTTGGGACATGGAGGGCCATGAAGCTGAGAAACTCTATAGAGTAGCTAGTTCAAGCTCAACCCAGCATCCCCAATTTGCTTCTGCAACTGAGAAACCAATCCTGAATATGGAAACAGTGGAAGACTACCATGTGTTGGCTCATTTGGATCAATTTCAAAGCTCACATTACATTCCACTTTACTACTCACAAGTAAACACTCTGACTCAAATCCCACGGCAGAAATTCTCTCCAAACATATCTCTTCACAGTAACATCAATGAAGCAAAAGCTATTGTTGATGACCAGAAGAGAAGAAGAATGCTTTCTAACAGAGAATCTGCTCGCAAATCACGAATACGAAAGAAGCAACAAAAGGAAACACTTCAGTGTCGTGTAAATGATTTGCAAGGTATGAATGATCAACTCTCTAGAAAGATCATCACCTTACTGGAATGTAACCAGCAATTGCTCCAACAGAATCTTCAGCTTAAAGAGAAGGTTTCCTCTCTGCAAGAAGCCCTCTCAAACTTGTTAATCCCCAGTGGCCCCATAGCAGAGCCTTCACAGGCATAA 570 0.414 MQALKFWDMEGHEAEKLYRVASSSSTQHPQFASATEKPILNMETVEDYHVLAHLDQFQSSHYIPLYYSQVNTLTQIPRQKFSPNISLHSNINEAKAIVDDQKRRRMLSNRESARKSRIRKKQQKETLQCRVNDLQGMNDQLSRKIITLLECNQQLLQQNLQLKEKVSSLQEALSNLLIPSGPIAEPSQA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1345 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 162 IPR004827 GO:0003700|GO:0006355
Alju13g1345 189 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 35 180 IPR044521 -
Alju13g1345 189 SUPERFAMILY Leucine zipper domain 101 158 IPR046347 GO:0003700|GO:0006355
Alju13g1345 189 MobiDBLite consensus disorder prediction 105 124 - -
Alju13g1345 189 CDD bZIP_plant_GBF1 102 150 IPR045314 GO:0003700|GO:0006355
Alju13g1345 189 Gene3D - 100 153 - -
Alju13g1345 189 Coils Coil 124 144 - -
Alju13g1345 189 Coils Coil 152 172 - -
Alju13g1345 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Alju13g1345 189 SMART brlzneu 97 161 IPR004827 GO:0003700|GO:0006355
Alju13g1345 189 Pfam bZIP transcription factor 101 159 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1345 Alju-ChrAlju13 32183704 32184273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1345 53 179 bZIP Transcription Factor Family AT5G60830 44.361 8.40e-23 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju13g1345 bZIP_1 5.9e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1345 13 32183704 32184273 Alju06g2812 06 55061231 55061851 CCT