Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1344 ATGTCGAAGCTACTTCTCCGCAGCTCTCATCTCAGCTCATTTCACCGATGCATCACTTTCCCTGCCACTCCCTTATCTGCCTCTGTTGCCTTCGTTTCTTGCCTCCATTTTCGAAGCCGCTTCTCCGTTTCGGTTTCTTCTCAATCTCACCTTCGAAGCATCTGTCACTTTCAGTCCCGTAGAGACCTATCAGTTTGTGCCTTCGATTCTTCATCTTCAGAGACTAAGGACGAGGAAAAAGCTGTGGGGAAGGATGGAATCAATAATCAGTCTGTTAAAACCGCCGATGAGGATTATCCGACCGGGGAATTTGAATTTGAACCCATTACGGGGTGGAGAGGATTTCTAGTAAAGCTTAAGATGCTGGTTGCTTTCCCTTGGGAGCGTGTTCGCAAGGGCAGCGTTCTCACAATGAAGTTGCGCGGCCAGATATCCGATCAAATAAAGAGTAGATTCTCTCGAGGATTGTCTCTACCTCAGATTTGTGAGAACTTTCTGAAAGCTGCATATGATCCCCGTATTTCTGGTGTCTACCTCCATATTGATATTTTGAATTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATACTGAACTTCAAACAGTCGGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCAGGAAAAAGAGTACTACCTCGCTTGTGCTTGTCACGAGATATACGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGCTTGACTGTTCAAGCTTCATTCCTCAGGGGTGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGTAAATACAAAAGCGCTGGGGATCAACTGGCCCGCAGAGCCATATCTGACGCAAACAGTGAGATGCTGACTGCATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCATCTGCAAAAGGAAAAAAACGAGAAGATATTGAGAACTTTATAAATGAAGGAGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAACATAATCTATGATGACGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGAAAACAGATAAAAATCTTCCTATGGTGGATTACAGAAAGTATTCCAGAGTTAGGAAATGGACTGTTGGAATATCAGGTGGTAAAGACTTGATAGCTCTCATCCGAGCCTCAGGGAGTATTAGCCGTATTGAAGGTCCATTAGGTATGTCAGGCTCAGCGATCATTGGGGAGAAGTTTATTGAGAAGATTCGCAGTGTCAGAGAGTCCGAAAGATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTTGCGTCTGATCTGATGTGGAGAGAAATCAGACTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGTGGATATTATATGGCAATGGCAACAGGAACTATTGTTGCAGAAAGCCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGGAAAATTTAACCTGGGTAAACTGTACGAGAAGATTGGATTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTACTTGCGGCAGAACAACGCCCTTTTAGACCCGATGAAGCCGAGTTATTTGCCAAGTCTGCACAGCATGCTTACAAGCAATTTCGGGATAAGGCAGCATTATCCAGATCCATGACTGTAGATAAGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACCGGTAAAGATGCAGCTGATCGTGGTTTGGTCGATGCTATCGGTGGGCTTTCTCGTGCAATTGCCATAGCGAAATCGAAGGCCAACATACCTCAAGACAAACAGGTAACAATTGTGGAGCTCTCACGAAGCAGCCCTTCCCTGCCAGAGGTTTTAAGCAGCATTGGGAGCACCCTAGCTGGAGTAGACAGAACAATGAAGGAGCTGTTACAAAGCTTGACACTTTCTGATGGGGTTCAAGCCAGGATGGATGGAATCATGTTTGAGAGATTGGAAGGATATGCTTACGCCAATCCCATATTGACATTGATAAAAGATTACCTTAGTTCCCTGTAG 2055 0.4394 MSKLLLRSSHLSSFHRCITFPATPLSASVAFVSCLHFRSRFSVSVSSQSHLRSICHFQSRRDLSVCAFDSSSSETKDEEKAVGKDGINNQSVKTADEDYPTGEFEFEPITGWRGFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQIKSRFSRGLSLPQICENFLKAAYDPRISGVYLHIDILNCGWGKVEEIRRHILNFKQSGKFVVAYVPSCQEKEYYLACACHEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRAISDANSEMLTALLDNIYTNWLDKVSSAKGKKREDIENFINEGVYQVDKLKEEGFITNIIYDDEVISMLKERLGVKTDKNLPMVDYRKYSRVRKWTVGISGGKDLIALIRASGSISRIEGPLGMSGSAIIGEKFIEKIRSVRESERYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMATGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAADRGLVDAIGGLSRAIAIAKSKANIPQDKQVTIVELSRSSPSLPEVLSSIGSTLAGVDRTMKELLQSLTLSDGVQARMDGIMFERLEGYAYANPILTLIKDYLSSL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1344 684 Gene3D - 133 369 - -
Alju13g1344 684 Pfam Peptidase family S49 201 353 IPR002142 GO:0006508|GO:0008233
Alju13g1344 684 Pfam Peptidase family S49 452 603 IPR002142 GO:0006508|GO:0008233
Alju13g1344 684 PANTHER PROTEASE 4 90 683 - -
Alju13g1344 684 Gene3D - 529 656 - -
Alju13g1344 684 PIRSF Protease_4_SppA 65 684 IPR004634 GO:0006465|GO:0008233|GO:0016020
Alju13g1344 684 SUPERFAMILY ClpP/crotonase 408 589 IPR029045 -
Alju13g1344 684 CDD S49_SppA_67K_type 136 349 IPR047217 -
Alju13g1344 684 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Alju13g1344 684 NCBIfam signal peptide peptidase SppA 395 598 IPR004635 GO:0006508|GO:0008233
Alju13g1344 684 Gene3D - 379 528 - -
Alju13g1344 684 SUPERFAMILY ClpP/crotonase 125 342 IPR029045 -
Alju13g1344 684 CDD S49_Sppa_N_C 384 598 IPR047272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1344 Alju-ChrAlju13 32175138 32182405 Wgd