Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1339 ATGTTCTCTGATGTAGTGCAACAGTTAAATGTTTTCTCTAATGTGTCGACATCCCTAGTTTCCTTTATGGCACCACAAGATACTGCCTCTGGTGTTGAAATGCCCCAGAAAACTTCTGGTCTGCTGCGGGATCAGGTTCAGCTGGTAAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCCGATTCTCTCTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGATAATATTAGTAGGAGTTGCTGGACCCTCTGGAGCTGGGAAGACAGTTTTCACTGAGAAGGTCCTCAACTTCATGCCAAGCGTTGCTGTCATAACAATGGACAACTATAATGATTCTAGCCGAGTCATAGATGGCAACTTTGATGACCCTCGGCTGACAGATTATGACACATTGCTCGAAAATATACAGGGTCTCAAAGCTGGCAAGGCAGTTCAGGTTCCAATATATGATTTCAAGTCTAGCGCTCGCATAGGCTACAGGACCGTTGAAGTCCCTAGCTCCCGTATTGTCATCGTAGAAGGCATCTATGCCTTGAGTGAAAAATTACGTCCTTTGCTAGATCTTCGGGTGTCTGTCACTGGAGGAGTACACTTTGACCTTGTCAAGCGGGTCTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATTTCAGAAACGGTATACCCGATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCTCATATAAAAATCATAAACAAGTTTAACCCATTCTCTGGATTCCAGAACCCAACCTACATATTGAAATCAACAAAGGCTGTGACGGAGGATCAAATCAAGGACATTATTGCTGCAGAGCATACTGAAAACACAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGACCCTGAGGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGGAAGTACAATCTTATGTTTGAGGAATGGGTTACAGACAGTCCGTTCATAATATCTCCTAGAATTACTTTTGAGGTTAGTGTACGCCTTCTGGGGGGCCTGATGGCCTTGGGGTACACAATTGCTGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGATAAAGTATCAGTAAAAACTGATTGGTTGGAACAACTTAATCGCCTATATGTTCAGGTGCAAGGGAGAGATAGAAACTATGTTAAATATGTGGCAGAGAAACTGGGGTTGGATGGTTCATATGTTCCACGCACCTACATTGAACAAATTCAGCTGGAGAAGCTTATAAATGATGTGATGGCATTGCCAGATGATCTGAAGACCAAACTCAGTATAGATGATGATGTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAACGAAGTACTTAAATCGAAGTTTGTCACACTCATATTCAAGTCAAAGAGACAAGAGTCTATCTAAGTTGACTAGATTAGCTATAAACAACCGAAGATTTGATGGACGTGCTCTAGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACGTTAAATGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATTCGAAGTTTGCAAACAGAAAAGTCTCCGCCAGTCAGCAGAACTTGGCTTTACAGGCTGAAGCTTGCAATGGTTCGGGACCCACTTCCCACTTCCTTAATGGGTTGGGTAATGGTTCGTTGACTGGATCGCTGTTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCCACTGTTGGAAGAGGTTGTACTTATTGCACGGGGACAACGTCAAATCATGCACCAACTAGATAGTCTGAACAATCTTTTGCATGAATACTTTGGAGAGAGAGCTCGTCTAGGAAGAGCAAACCAGACAAGCAGGATGCCTGACGTTGACTTCACCATCCCGCTTGTTCTGACTTTGGCAATTGGTGCTGTTGGCGTATTTTTGTTCAAGGGTCTGACATCTCATAAATAA 2052 0.4308 MFSDVVQQLNVFSNVSTSLVSFMAPQDTASGVEMPQKTSGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFMPSVAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKAVQVPIYDFKSSARIGYRTVEVPSSRIVIVEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTKAVTEDQIKDIIAAEHTENTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLNRLYVQVQGRDRNYVKYVAEKLGLDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSIDDDVVLSPKEALSRASADRRTKYLNRSLSHSYSSQRDKSLSKLTRLAINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFANRKVSASQQNLALQAEACNGSGPTSHFLNGLGNGSLTGSLLPNSSSSSQLARESPLLEEVVLIARGQRQIMHQLDSLNNLLHEYFGERARLGRANQTSRMPDVDFTIPLVLTLAIGAVGVFLFKGLTSHK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1339 683 Pfam Phosphoribulokinase / Uridine kinase family 92 260 IPR006083 GO:0005524|GO:0016301
Alju13g1339 683 ProSiteProfiles CYTH domain profile. 272 434 IPR023577 -
Alju13g1339 683 PANTHER URIDINE KINASE 38 447 - -
Alju13g1339 683 Gene3D - 277 437 - -
Alju13g1339 683 Gene3D - 90 271 IPR027417 -
Alju13g1339 683 Pfam CYTH domain 296 428 IPR023577 -
Alju13g1339 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 260 IPR027417 -
Alju13g1339 683 CDD UMPK_like 91 263 - -
Alju13g1339 683 Coils Coil 524 551 - -
Alju13g1339 683 PRINTS Uridine kinase signature 248 261 - -
Alju13g1339 683 PRINTS Uridine kinase signature 156 171 - -
Alju13g1339 683 PRINTS Uridine kinase signature 212 222 - -
Alju13g1339 683 PRINTS Uridine kinase signature 89 106 - -
Alju13g1339 683 SUPERFAMILY CYTH-like phosphatases 284 431 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1339 Alju-ChrAlju13 32107113 32112240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1339 91 260 PRT Gene Family AT5G40870 27.933 6.02e-17 82.4