Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1326 ATGGATTCGATGGACATCGTTGGGAAATCAAAGGAAGACGCTTCCCTTCCTAAAGCAACTATGACAAAAATTATCAAAGAGATGTTACCTCCTGATGTACGTGTTGCAAGAGATGCACAAGATCTATTGATTGAATGCTGTGTAGAGTTTATAAACCTGGTTTCATCAGAGTCCAATGAAGTCTGTAACAGAGAGGATAAACGGACAATCGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGGTTTAGTGAGTACATTGAGGAGGTTTATGCAGCATATGAGCAGCATAGGATTGAGACCATGCAGGACTCTTTAAGAGCTGGCAAGTGGAGTAATGGAGCTGAGATGACTGAGGAGGAAGCATTACTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAACGGTGGGACCATTGCTTCCAAGCAGCCAGATGCTGACCAAACTTTAGATGGCTAA 471 0.4416 MDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETMQDSLRAGKWSNGAEMTEEEALLEQQRMFAEARARMNGGTIASKQPDADQTLDG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1326 156 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Alju13g1326 156 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
Alju13g1326 156 Gene3D Histone, subunit A 4 142 IPR009072 GO:0046982
Alju13g1326 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Alju13g1326 156 FunFam Negative cofactor 2 beta 6 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1326 Alju-ChrAlju13 32004733 32008415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1326 1 153 CCAAT-DR1 Transcription Factor Family AT5G23090 84.314 3.79e-94 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju13g1326 CBFD_NFYB_HMF 3.9e-22 CL0012