Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1311 ATGTTTCCTTCTAACCCTTTTCCCTTTGACAGCAACCTAAACTCCACGCAACAACAAAGCCTTCTTCCTCCTCCTCCTTTCTCCTTTCTTCACTTTCCTCCACCTTCCTTTGAAGACAATGAAAACTTCCTCCCTCGTCAGCAACCAAACCACCACCGCCACTATGATCATCTCTTACTTCATCATCAACAATCACAACCTCTAGCTGAAGCATCAGGCATGGAGGTTCCGAGGAAGAACGAGCAGATCCCGGCGACGACGAGGAATAAGAGGATTTGCAAGAGAGATAGGCACAGCAAGATCAAGACGGCTAAAGGGCTGAGAGATCGGAGAATGAGACTTTCTCTGGAAGTAGCCAAGAGATTCTTTGGTCTTCAAGACATTCTAGGCTTTGACAAGGCCAGCAAAACCGTTGAGTGGTTGCTGAATCAGTCAAAGGATGAGATCAAACAGCTAGCAATAGACAAGAATTACAATAATAATTACAGTGGGATCAGTGGTGGGGTAGTGAAGATTGCATCCTCAACTTCAGAGTGTGAAGGGGTTTCAGGTTTAGACGATGTGGCATTAAGTGGAATGAATCAAGAACAACAAGAGGGAGATCAACAACGACCCTTACTGGTAACGAAGAGGAGGACAAGAAATACAAGAAAGAATGCACTTTTATTGGATCCTCTAATTGCAAGAAAGTCAAGGGAAAAAGCTAGAGAGAAGGCAAGAGAGAGGACCAAGCAGAAGCAGAAGATGGAGATGAAAGGTCGAAAATTATTTCCAGAAGCAGCTGATGACTGCACAACCAACCATAATTGTAATCTCACACAATTTGGTTCATGGAATCCGTTTGAAACAGGAGAAAAGGTGATTAATCCTACCTTAGAGGTCAATATGGCTGAGGCTCCTGAAGACGAACCAAGTTCTCAGGCAAACGAAGATGATGATTCCTTGGCGGTTAATATGATATTCAACTCATTGAATACTTCATCTACATTCGTACAAGATCATCATCAATTTGTGGAATTTCAGTCCTTGGCAAAACTTTGGGAGGCCTGCAACAATCACATGATCTAA 1068 0.4316 MFPSNPFPFDSNLNSTQQQSLLPPPPFSFLHFPPPSFEDNENFLPRQQPNHHRHYDHLLLHHQQSQPLAEASGMEVPRKNEQIPATTRNKRICKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDILGFDKASKTVEWLLNQSKDEIKQLAIDKNYNNNYSGISGGVVKIASSTSECEGVSGLDDVALSGMNQEQQEGDQQRPLLVTKRRTRNTRKNALLLDPLIARKSREKAREKARERTKQKQKMEMKGRKLFPEAADDCTTNHNCNLTQFGSWNPFETGEKVINPTLEVNMAEAPEDEPSSQANEDDDSLAVNMIFNSLNTSSTFVQDHHQFVEFQSLAKLWEACNNHMI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1311 355 ProSiteProfiles R domain profile. 229 246 IPR017888 -
Alju13g1311 355 MobiDBLite consensus disorder prediction 1 31 - -
Alju13g1311 355 ProSiteProfiles TCP domain profile. 94 152 IPR017887 -
Alju13g1311 355 Pfam TCP family transcription factor 94 249 IPR017887 -
Alju13g1311 355 Coils Coil 232 252 - -
Alju13g1311 355 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 63 349 IPR005333 GO:0003700
Alju13g1311 355 MobiDBLite consensus disorder prediction 231 251 - -
Alju13g1311 355 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1311 Alju-ChrAlju13 31819840 31821150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1311 24 263 TCP Transcription Factor Family AT3G18550 37.500 1.75e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju13g1311 TCP 1.3e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1311 13 31819840 31821150 Alju13g1311 13 31819840 31821150 ECH