Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1298 ATGGCCGACTTTTTTTACGCTTGGCGTTTGATCATTGTCTTCTTCGTCGTCTCTCTTCTTCTCCTGCGAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCAGACCCCACACGCGAATCGCGTCCAATGGAACGCTTCCGACTCAGCCTGCAACTGGTTTGGTGTTGTATGCGACGCTTCTCGTTCCTTCGTCTTCTCTCTTCGTCTTCCCGGCGTTGGGCTTGTGGGTGAAATTCCTCCCAACACAATCGGTCGTCTCACTCAGCTTCGAGTTCTGAGTCTCCACTCTAATGGTCTCTCCGGCGAGATCCCTGCCGATTTCTCTAATTTGACGTTGCTTCGGAACTTGTATATCCAGGATAACCAGCTCTCCGGCGGGTTTCCTCTGTCTCTGACTCAGTTGGGTCGGTTGACTCGCTTGGATCTCTCATCCAACAATTTTACGGGTCCAATCCCTTTCTCCATCAACAATTTGACCCACTTGACTGGTCTATTCTTGCAAAGCAATAAGTTCTCGGGCAATCTACCAAGCGTGAGCGCTAAATTGGTGGGATTCAACGTTTCTAACAATCAGCTCAATGGTTCGATCCCCAAATCTCTCTCGAATTTCCCTGCATCATCATTCGCCGGAAACTTAGATCTCTGCGGCGGACCATTGCCGCCATGCACCCCATTCTTCCCGTCTCCGGCTCCGTCGCCTTCCTCCCCAGCGGTACCCTCTTCCCCAGTTCAGAAAAAGTCCAAGAAGCTCTCAAAAGGCGCCATTATCGGAATTGCAGTCGGGTGTTCTCTTGCGGCCTTGTTACTCCTCCTGCTCCTGCTCCTGCTCTGCCTAGGCAAACGCCAGCGAAGCCAGCCGGCGAAGTCGCCGAAGCCCGTGGTTGCGGCGCGTGCTGCGCCGGCGGAGGCCGGAACATCGTCCTCAAAAGACGATATCACCGGTGGGTCGGTGGAGGCAGAGAGGAACAAGCTGGTGTTCTTCGAAGGCGGGATGTACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCCGCCGAAGTTCTGGGCAAAGGAAGCGTCGGAACTTCCTACAAAGCGGTTCTGGAAGAAGGAACTACAGTGGTGGTAAAGAGATTAAAAGACGTGGCTGTAACAAAGAAAGACTTCGATGCTCAAATGGATGTTCTGGGCAAGATTAAACACGAGAATGTGGTTCCTCTCAGAGCTTACTATTTCTCCAAGGATGAGAAATTGCTCGTCTACGATTACCTCCCATCTGGTAGCTTGTCGGCTCTGCTTCACGGGAGCAGGGGGTCAGGGAGGACGCCACTTGACTGGGATAACCGAATGAGAATAGCGCTAGGTGCCGCCAGGGGGTTGCTTCACCTACACGTGTCGGGAAAAGTGGTCCACGGCAACATCAAAGCGTCCAACGTACTCCTCAGAGGAAACGACAACGAGGCCTGCGTTTCGGACTTCGGGCTCAACCTGTTGTTCGCTAACACCACCCCCTCCAACCGGGTTGCGGGCTACAGGGCACCCGAAGTACTCGAAACCCGGAAAGTCACTTTTAAATCCGACGTGTACAGCCTCGGCGTTTTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGCGAGGAGGGGATTGACCTTCCGAGATGGGTTCAGTCGGTGGTCCGGGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCGTGCGTGTCGGTGGTTCCCGATCAGAGACCGACCATGCAGGAGGTGGTTCGGATGATGGAGGAGATCAATAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCGTCGGACGATCCATCGAAGGGATCGGACGGTCAAACGCCGCCGGCCGAGTCAAGGACTCCACCCAGATCAATCACACCTTGA 1968 0.5462 MADFFYAWRLIIVFFVVSLLLLRVSTEPTQDKQALLAFISQTPHANRVQWNASDSACNWFGVVCDASRSFVFSLRLPGVGLVGEIPPNTIGRLTQLRVLSLHSNGLSGEIPADFSNLTLLRNLYIQDNQLSGGFPLSLTQLGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNKFSGNLPSVSAKLVGFNVSNNQLNGSIPKSLSNFPASSFAGNLDLCGGPLPPCTPFFPSPAPSPSSPAVPSSPVQKKSKKLSKGAIIGIAVGCSLAALLLLLLLLLLCLGKRQRSQPAKSPKPVVAARAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGMYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMDVLGKIKHENVVPLRAYYFSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLLHLHVSGKVVHGNIKASNVLLRGNDNEACVSDFGLNLLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSITP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1298 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 628 - -
Alju13g1298 655 MobiDBLite consensus disorder prediction 616 655 - -
Alju13g1298 655 SUPERFAMILY L domain-like 32 210 - -
Alju13g1298 655 MobiDBLite consensus disorder prediction 291 321 - -
Alju13g1298 655 Gene3D Ribonuclease Inhibitor 189 229 IPR032675 -
Alju13g1298 655 MobiDBLite consensus disorder prediction 616 631 - -
Alju13g1298 655 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Alju13g1298 655 Pfam Protein kinase domain 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1298 655 SUPERFAMILY Protein kinase-like (PK-like) 352 615 IPR011009 -
Alju13g1298 655 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Alju13g1298 655 PANTHER OS05G0588300 PROTEIN 13 627 - -
Alju13g1298 655 FunFam pollen receptor-like kinase 1 318 422 - -
Alju13g1298 655 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Alju13g1298 655 MobiDBLite consensus disorder prediction 632 655 - -
Alju13g1298 655 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Alju13g1298 655 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1298 655 FunFam Probable inactive receptor kinase RLK902 28 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1298 Alju-ChrAlju13 31683069 31685851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1298 5 638 Receptor kinase-like Gene Family AT5G58300 52.960 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju13g1298 Pkinase 4.6e-37 CL0016