Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1293 ATGCTTGAAAAAAGCAGTACTAGTAGAGCTAAAATAGGGTGTGCATGTGTGGCCACTCTAGAGTTTGAAAACTTCGACGCACACACATTTGTATTACAAAGGAGGAGGAAGAAGAAGTTGAGTTGGCTCGTAGAAAGAAACATTAAAAACAACACAACACATAGCGTAAAGCACAAGAACTATTCTGTGAAAATGAAGGACCCAGAAGAAGATCAAGTTATTAAATCCAGAAAGGCTATGCAGAAACACACTACGGATCGTAGAAGAGGTAGGAGAAGAAGCCATTGCAATAAACCCGAGATATTAAAAGAAAAAGGGGTTGATTTAGAACTGATCAATCCTTATGCTGCTGCTTCTTGCAATAATAATGGCCTTGAGTTCACCCATAGGCCTGGCTATGGCCAGCTTGGGACAAAGTGTGTGGTCAAAGCTAACCACTTTCTTGCAGATATATCTGCATCTGACTTGAGCCATTACAGTGTTAAGATAACACCTGAAGTTACTTCCCGTAAAATAAGCAAAGCTATTATTGCTGAGTTGGTGAGACTTCATAGAAACACAGACTTGGGTACGAGGCTCCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCTGGTTTGCTTCCTTTTACACTCAAAGAATTCACCATTACATTAACCGAAGAAGATGAGGGTACAGGCAATACCTGGGAAAGAGAGTTTAGAGTGAAAATCAAGTTTGCAACTCGTGTTAGTATGCATCAACTACGGGAACTTCTCAGTGGGAAACAAGTGAACACTCCACAAGAAGCACTTAACATCATTGATATTGTATTAAGGGAACTTGCAGCTCAAAGTTACGTGTCAGTTGGAAGGTTTCTCTATTCTGCTGATATAAAAAAACCACAGCAGCTAGGTGGTGGTCTGGAATCATGGCGTGGTTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCTCTTAACATTGACATGTCATCAATGGCGTTTATTGAACCACTCCCTGTCATTGATTTTGTTGCTCAAATTTTGGGTAAAGATGTGCATTCAAAACCATTATCAGATGCAGATCGTGTCAAGATTAAAAAAGCCTTGAGAGGCGTGAAAGTTGAAGTTACACATAGAGGAAATGTTAGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTCCGGGAGATGTATGGTTATACAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAATGAAAAGAAGGTCAATTATTTGCCAATGGAGGCTTGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTAAATGAGAAACAGATAACTTCTCTGCTTAAAGTTTCGTGCCAAAGACCCCGTGAACAGGAGCTTGACATTCTACAGACAGTTGAACAAAATGATTATGAGAATAATCCCTATGCAAAAGAGTTTGGTATCAGCATAGATGACAAGCTTGCATCGGTTGAAGCTCGGGTTCTGCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAACGGAAGCATAGTCAGATACTGGGCATGTATCAATTTCTCACGTAGTGTTCAAGAGAGCACAGCTCGTGGTTTTTGCCAACAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGAGCCAGTAATTCCTATATATACAGCAAGACCAGATCAGGTTAAAAAGGCCTTGAAATATGTACACTCTGCTGCTTTAGACAAACTTGAAGGGAAAGAACTAGAATTGCTCATGGCTATTCTTCCAGACAATAATGGCTCTCTGTACGGTGATCTCAAAAGGATATGTGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTCACAAAACACGTCTTCAAGGTTAATAGACAATACCTGGCAAATGTGGCGCTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCATTGAGTTGGAGAATTCCATTGGTTAGTGACATTCCAACGATTATATTTGGAGCTGATGTAACTCATCCAGAATCTGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGCGAAGAACTCATTCAAGATCTTTTCAAGTGTTGGAAAGATCCTCAGCGTGGCGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCTACTGGACAAAAGCCATTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAATTCTACCAGGTTTTGTTGTATGAACTTGACGCAATCCGCAAGGCTTGTGCATCACTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAGCGGCATCACACTCGACTCTTCTCAAGCAATCACGACGACAGAAATAGCACTGACAGGAGTGGCAACATCTTACCAGGAACCGTGGTGGATTCTAAGATCTGTCATCCCACAGAATTTGACTTTTATTTATGTAGTCATGCAGGAATACAGGGCACGAGTAGACCTGCTCACTATCATGTCCTCTGGGATGAGAACAAATTCACTGCAGACGAGATTCAATCCTTAACCAACAACTTATGCTACACGTATGCAAGATGCACAAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCTTACAGGGCTCGATTCTACATGGAGCCTGATGTGCATGAGAATGCTAAAGCACGCGGTGGTGGGGCAAGATCAAAGGATGGTTCGGTTCGGCCATTACCGGCTTTGAAGGAGAAGGTGAAGAATGTAATGTTCTACTGTTGA 2946 0.4202 MLEKSSTSRAKIGCACVATLEFENFDAHTFVLQRRRKKKLSWLVERNIKNNTTHSVKHKNYSVKMKDPEEDQVIKSRKAMQKHTTDRRRGRRRSHCNKPEILKEKGVDLELINPYAAASCNNNGLEFTHRPGYGQLGTKCVVKANHFLADISASDLSHYSVKITPEVTSRKISKAIIAELVRLHRNTDLGTRLPVYDGGRNLYTAGLLPFTLKEFTITLTEEDEGTGNTWEREFRVKIKFATRVSMHQLRELLSGKQVNTPQEALNIIDIVLRELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNPYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPIYTARPDQVKKALKYVHSAALDKLEGKELELLMAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAKARGGGARSKDGSVRPLPALKEKVKNVMFYC 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1293 981 Pfam Argonaute linker 2 domain 478 520 IPR032472 -
Alju13g1293 981 ProSiteProfiles Piwi domain profile. 622 943 IPR003165 GO:0003676
Alju13g1293 981 SUPERFAMILY PAZ domain 329 488 IPR036085 GO:0005515
Alju13g1293 981 SMART Piwi_a_2 622 943 IPR003165 GO:0003676
Alju13g1293 981 FunFam Protein argonaute-2 327 453 - -
Alju13g1293 981 CDD Piwi_ago-like 492 942 IPR045246 -
Alju13g1293 981 Pfam Argonaute linker 1 domain 282 331 IPR014811 -
Alju13g1293 981 SMART PAZ_2_a_3 338 470 IPR003100 GO:0005515
Alju13g1293 981 Pfam Mid domain of argonaute 531 608 IPR032473 -
Alju13g1293 981 Gene3D paz domain 328 452 - -
Alju13g1293 981 MobiDBLite consensus disorder prediction 65 96 - -
Alju13g1293 981 Pfam Piwi domain 623 942 IPR003165 GO:0003676
Alju13g1293 981 Pfam PAZ domain 338 464 IPR003100 GO:0005515
Alju13g1293 981 SMART DUF1785_2 281 333 IPR014811 -
Alju13g1293 981 Gene3D - 691 981 IPR036397 GO:0003676
Alju13g1293 981 FunFam protein argonaute 10-like 691 981 - -
Alju13g1293 981 ProSiteProfiles PAZ domain profile. 334 448 IPR003100 GO:0005515
Alju13g1293 981 MobiDBLite consensus disorder prediction 65 80 - -
Alju13g1293 981 MobiDBLite consensus disorder prediction 81 96 - -
Alju13g1293 981 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 121 944 - -
Alju13g1293 981 SUPERFAMILY Ribonuclease H-like 611 944 IPR012337 -
Alju13g1293 981 FunFam Argonaute 10 512 685 - -
Alju13g1293 981 CDD PAZ_argonaute_like 333 447 - -
Alju13g1293 981 Gene3D - 512 685 - -
Alju13g1293 981 Pfam N-terminal domain of argonaute 138 272 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1293 Alju-ChrAlju13 31629797 31641043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1293 127 981 Eukaryotic Initiation Factors Gene Family AT5G43810 75.494 0.0 1406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1293 13 31629797 31641043 Alju13g1293 13 31629797 31641043 ECH