Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1269 ATGGCCACCTCCAAGGCCATAGCCAGAGACGAATCTGATTATGATAGTAGCTCCTCCTCCCTCACCACTCTGCCAGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGCCGCCGCAGCAGCTCCGTCTGTTCCTCCACCACCACAGACACCACCACCACCTCTTCTCTGTACCTCAGCTCCCACTCCAAGAAGCCTCACAAGGCCAACCAAGCAGCATGGGAGGCCATGTCCCGCCTCCGCCGCGACAGCAACGGCCACCTCGGCCTCCACCACTTCAGCCTCCTTCGCCGTCTCGGCGGCGGCGACCTCGGCAACGTCTACCTCTGTCAGATTAGAAACCCCCTCGTTGTGGGGTCAAAACAGAGTCTTTACGCCATGAAAGTTGTGGACAGAGAAGCACTTTCAGTGAGAAACAAGTTACAGAGAGCTCAGATGGAGAAAGAGATTCTGGGCATGCTTGATCACCCCTTTTTACCCACTTTATATGCCGAGTTCGATGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGTCCTGGTGGTGATTTATATGCTTCTCGCCAGCGTCAGCCAGGAAAACGATTCAGTATTCAATCGGCCAAGTTTTATGCAGCTGAGACACTGTTGGCTTTGGAATATCTTCACATGATGGGTATAGTGTACAGAGATTTGAAGCCAGAGAATGTGTTAGTGAGAGAGGATGGGCATATTATGCTCTCTGATTTTGATCTCTCTCTCAAATGTGATGTTGTTCCTAAGCTCTTGAGAAGTAAATCCAGTTTCAAAAGTATCCCAAGAGGCTCTTCATCATCATCATCATCAACAACAACAACAACATATCCTGCCTGTGCTGCCCCCGTGCAATCTTGTTTCTCATCAGCTTCATTTCGCAGCAAGAGCAAGAGAGAAAGTAGAGTCATTACAATCATAAGGGAAAATGCCGGAGTCCAAAAGCAACAAGAACAAAAAGACGATGAAGAAGAAGAACACATTGACGATGATGAAGATGATGAGCCGGAGCTAGTGGCAGAGCCTATAAATGCAAAGTCTATGTCATTTGTAGGGACTCATGAGTACTTAGCACCAGAAGTGATCTCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTATATGGAAGAACACCATTCAAAGGAGAGAACAATGGCAAAACACTCTTAAACATCCTGAAGCAGCCATTGGCATTTCCCAGAATTGCAGCTAGCAGCAGCAAGGAATATGAAGAAATGGTGAGAGTTCAAGACCTTATAAGCAAACTATTAGTGAAGAATCCCAAGAAGAGAATTGGAAGTTTCATGGGTTCTGTTGAAATCAAGAGGCATGAGTTCTTCAGAGGTGTCAATTGGGCTTTGATTAGATCAATAAGACCACCTGAGGTTCCTGCTGATATGAACAAGAATAGAAGTAGCAGTAACAGAGTTTTGTTACCAAAACTAAGCAAGAAAGATAGAGATCAGCCCTATCAGATTACTCATAATTTTGACTACTTCTAA 1554 0.464 MATSKAIARDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVCSSTTTDTTTTSSLYLSSHSKKPHKANQAAWEAMSRLRRDSNGHLGLHHFSLLRRLGGGDLGNVYLCQIRNPLVVGSKQSLYAMKVVDREALSVRNKLQRAQMEKEILGMLDHPFLPTLYAEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKSIPRGSSSSSSSTTTTTYPACAAPVQSCFSSASFRSKSKRESRVITIIRENAGVQKQQEQKDDEEEEHIDDDEDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLLNILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSFMGSVEIKRHEFFRGVNWALIRSIRPPEVPADMNKNRSSSNRVLLPKLSKKDRDQPYQITHNFDYF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1269 517 MobiDBLite consensus disorder prediction 44 67 - -
Alju13g1269 517 FunFam protein kinase PINOID 182 250 - -
Alju13g1269 517 Gene3D Transferase(Phosphotransferase) domain 1 182 251 - -
Alju13g1269 517 Gene3D Transferase(Phosphotransferase) domain 1 352 482 - -
Alju13g1269 517 SUPERFAMILY Protein kinase-like (PK-like) 78 485 IPR011009 -
Alju13g1269 517 Coils Coil 313 333 - -
Alju13g1269 517 FunFam serine/threonine-protein kinase D6PK-like 352 482 - -
Alju13g1269 517 MobiDBLite consensus disorder prediction 315 343 - -
Alju13g1269 517 ProSiteProfiles Protein kinase domain profile. 96 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1269 517 FunFam protein kinase PINOID 2 94 181 - -
Alju13g1269 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Alju13g1269 517 PANTHER FLIPPASE KINASE 1-RELATED 28 487 - -
Alju13g1269 517 Gene3D Phosphorylase Kinase; domain 1 94 181 - -
Alju13g1269 517 CDD STKc_phototropin_like 94 482 - -
Alju13g1269 517 SMART serkin_6 96 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1269 517 Pfam Protein kinase domain 97 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1269 517 Pfam Protein kinase domain 354 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1269 517 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1269 Alju-ChrAlju13 31425919 31427580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1269 1 517 AGC Kinase Gene Family AT2G26700 55.877 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju13g1269 Pkinase 2.5e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1269 13 31425919 31427580 Alju13g1269 13 31425919 31427580 ECH