Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1246 ATGTCGAATCAAATCGACCTGAATGGGCAAGTTCATAGTGAAGCAGTTCGACTTGTGCTTTTGGATAATGAAGGTGTAGAGACGACAATATTACTAGCTTCTTATGATTCAGACATGGTGGATGATGAGGTGGAAGAAGCAGGAATAATGGTGAATCCTGCAACTCAAAAGTCAATAGAAAGCTTAGAAAAGGTTAGAATTGCAGAGCCTACATTGTGTTCCATATGTTACGAGGACATTCCATCAAATAAAAGACAACAACAAAAAGAAGAAGAGGCAGTTCGAATTCCTAAACCTTGTGGTCATGTGTATCACCTTAATTGCATCCTCAAGTGGTTTAACAAGCACAATACTTGTCCTTTGTGTCGCCGCAAGATTCCAAGCTAGACTGGCTTTCCAGCATTAACCATTGTTATGACTTTAAGCTTTCTGGTTTTCAAGAAGAACAGGATGCTTAACAAAGCAGCAGCATTAAATGCGATGATGATGATGATATGGTTTTCATCAACAAAGACTGTTGCAGCAGCAGTAGTTGACCATGATCTGAATAATAATAGGTCTGATGTATATGTTTCACAGAGGTTAACACTGACACTAAACTTGAAAGTTTAA 612 0.384 MSNQIDLNGQVHSEAVRLVLLDNEGVETTILLASYDSDMVDDEVEEAGIMVNPATQKSIESLEKVRIAEPTLCSICYEDIPSNKRQQQKEEEAVRIPKPCGHVYHLNCILKWFNKHNTCPLCRRKIPSXTGFPALTIVMTLSFLVFKKNRMLNKAAALNAMMMMIWFSSTKTVAAAVVDHDLNNNRSDVYVSQRLTLTLNLKV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1246 203 CDD RING-H2_PA-TM-RING 73 123 - -
Alju13g1246 203 Pfam Ring finger domain 73 123 IPR001841 -
Alju13g1246 203 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 43 127 - -
Alju13g1246 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 129 IPR013083 -
Alju13g1246 203 SUPERFAMILY RING/U-box 62 133 - -
Alju13g1246 203 ProSiteProfiles Zinc finger RING-type profile. 73 123 IPR001841 -
Alju13g1246 203 SMART ring_2 73 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1246 Alju-ChrAlju13 31175560 31176696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1246 33 128 C3H Transcription Factor Family AT3G02340 36.111 2.74e-11 60.1