Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1241 ATGTCGAGCTGCAACATCGATGTTGCCCCTGAGCAACTTTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAACTTATTTGACATAGTGACGGTTCGATGTGGACACTGCAGCAATCTATGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTATCATGGCAAGATGTTCAGGCGGCTGGTGGATACAACAATCAGGAGTACAGAATTGAGACAGGTTCCTCTTCCAAATGCAACAACAATATGATTTCAATGAGAGCACCCTCCAATCATCATGTTTCTAAGGACAGAATTGTGAATCGCCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCCAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGGCTAACAATAATCAAGCTAAGATGGAGAATGGGAGTGAGAAGCATTTAATGACGAGGGCAGCACTTTTGAACAAATGA 573 0.4468 MSSCNIDVAPEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVQAAGGYNNQEYRIETGSSSKCNNNMISMRAPSNHHVSKDRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNNQAKMENGSEKHLMTRAALLNK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1241 190 CDD HMG-box_SF 116 152 - -
Alju13g1241 190 Pfam YABBY protein 9 162 IPR006780 GO:0007275
Alju13g1241 190 PANTHER PROTEIN YABBY 6-RELATED 1 173 IPR006780 GO:0007275
Alju13g1241 190 SUPERFAMILY HMG-box 103 155 IPR036910 -
Alju13g1241 190 Gene3D High mobility group box domain 99 158 IPR036910 -
Alju13g1241 190 FunFam axial regulator YABBY 5-like 100 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1241 Alju-ChrAlju13 31143828 31147868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1241 8 173 C2C2-YABBY Transcription Factor Family AT2G26580 74.096 7.92e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju13g1241 YABBY 7.1e-70 CL0114