Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1205 ATGTCGGGAGGCACGCAGAATAGTCTAAGAAAAGCTCTCGGAGCCCTCAAGGACACGACAACGGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAACTGGACATTGCTATAGTGAGAGCAACAAATCATGTGGAGCGTCCATCAAAGGAGAAACATATAAGAGCTATTTTTTCTGCAATCTCTGCTACTAGGCCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGACGATTGTCAAAGACACATAACTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCACCGTGCTTTAAGGGAAGTGGATCCCACATTCCACGAGGAGCTTATAAATTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTCAAAGATGATTCCAGTCCAAATGCATGGGATTATTCAGCATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGACTGGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTCCAAGGACTAAAGATTTGGACACTGCAGAGCTGTTGGAGCAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAATAATTTTGTCATTCAGCTAGCACTCTCAATGGTCGCTTCAGAAAGCATTAAAATTTATCAAGCTATCAGTGATGGCACTATCAATCTGGTTGATAAGTTTTTTGAGATGCAACGCTCTGATGCTTTGAGAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGACTGAGAGGCTCTCTGAGTTTTATGAAATTTGTCGAAACCTCGATATTGGACGAGGAGAGAAATTTGTTAAAATCGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCCCGGGATTCAATAGTCCGCAAGGATCAGGCCACTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAAGAAGACATCAGAGGCGCAGGAGGCACCTGCAGTGCCTGTGCAGGAGTCACCTCCACCTCCACCTCCTGAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCACCGCCTGATTTGTTGAATTTGGACGATCCTGTTCCAGCTGCTTCAGAGTTGGAAGAGAAGAATGCCTTGGCATTAGCCATTGTTCCTGTTGCTGATCAGCCAACTTCTGTTTCAAAACAAGAAAATGGAACTACAGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGCTTCAGCTAGCAAACTGGCGGGAGGGTTAGACAAGCTTACGCTAGACAGCCTATATGATGATGCAGTCAGAAGGAACAACCAGAACGTGAGCTATAATCCATGGGAACAAGCTCCTATGGGAACCATGATGCAACCGACAATGCGTGATCCATTTTTCGCTTCTAATGCAGTTGCTGCTCCACCTTCTGTCCAGATGGCTGCTATGTCCAACCAGCAGCAGGCTTTCTTGTTTCATCAGCAGCAGCAGCAGCAGCAAATGATGATGATGGCCCCTCAGCAACCATCTGCTAATCCTTTTGGAAATCCTTATGGAGCCACTGTCCGCCCCTATGGCTCAGGTATGCCTGTTCAATCGTACAATCCATACACTGGTCTCATCTAG 1653 0.4549 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTINLVDKFFEMQRSDALRALDIYRRAGKQTERLSEFYEICRNLDIGRGEKFVKIEQPPASFLQAMEEYVKDAPRDSIVRKDQATDNKIASPKEVLAIEYKKTSEAQEAPAVPVQESPPPPPPEPVKVEAPAAQPPPDLLNLDDPVPAASELEEKNALALAIVPVADQPTSVSKQENGTTGWELALVTAPSSNESASASKLAGGLDKLTLDSLYDDAVRRNNQNVSYNPWEQAPMGTMMQPTMRDPFFASNAVAAPPSVQMAAMSNQQQAFLFHQQQQQQQMMMMAPQQPSANPFGNPYGATVRPYGSGMPVQSYNPYTGLI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1205 550 Gene3D ANTH domain 165 314 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Alju13g1205 550 SUPERFAMILY GAT-like domain 169 300 - -
Alju13g1205 550 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 503 IPR045192 GO:0048268|GO:0072583
Alju13g1205 550 MobiDBLite consensus disorder prediction 341 368 - -
Alju13g1205 550 FunFam putative clathrin assembly protein At5g35200 166 318 - -
Alju13g1205 550 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Alju13g1205 550 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Alju13g1205 550 SMART enth_2 32 164 IPR013809 -
Alju13g1205 550 MobiDBLite consensus disorder prediction 334 368 - -
Alju13g1205 550 CDD ANTH_N 34 157 - -
Alju13g1205 550 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Alju13g1205 550 FunFam Clathrin assembly protein AP180 8 164 - -
Alju13g1205 550 Gene3D - 7 164 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1205 Alju-ChrAlju13 30732465 30736597 Dispersed/Transposed