Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1198 ATGGCGGGAAATGACTGGATAAACAGCTACTTGGAGGCGATACTGGATGTCGGACCTGGTATCGATGATGCCAAATCCTCTCTACTACTCAGAGAGAGAGGTAGATTCAGTCCCACTCGCTACTTCGTTGCCGAGGTCATTTCTGGTTTTGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCTTCAGCTACGAGGAGTCCCCAGGAGAGGAATACTAGATTGGAGAATATGTGTTGGAGGATTTGGAACTTGGCTCGGCAAAAGAAGCAGCTTGAGAACGAGGAAGCACAAAGATTCAATAAACGTCATCTTGAACGTGAAAGAGGCCGCAGAGAAGCAACTGCTGATATGTCAGAGGACTTATCAGAGGGAGAAAAAGGAGATCCAGTGAGTGATGTTTCAGCTCATGGCGATAGTACAAGAGGAAGACTTCCTAGAATCAGTTCTGCCGATTCCATGGAGACATGGGCTAACAGTCAAAAGGGGAAGAAACTCTATATTGTACTCATAAGCATTCATGGTCTAATAAGAGGTGAGAATATGGAGCTGGGACGGGATTCTGATACTGGTGGTCAGGTTAAGTATGTCGTGGAACTTGCAAGGGCCTTGGGCTCAATGCCAGGAGTTTATAGAGTGGATTTGCTAACTAGACAAGTGTCATCACCAGATGTGGATTGGAGTTATGGGGAGCCAATCGAAATGTTGACTCCAAGAAACCAAGATGATTTAACAGATGATAGGGGAGAGAGCAGTGGTTCTTATATAATTCGTATACCCTTTGGTCCAAGGGATAAATACATTCCCAAAGAACATCTCTGGCCTTACATTCCTGAATTTGTTGATGGTGCTGTTGGCCACATCATACAGATGTCAAAAGCTCTTGGGGAGCAAATTGGTGGTGGGCATGCTGTCTGGCCTGTTGCCATTCATGGACATTATGCAGATGCAGGGGACTCTGCTGCTCTTCTATCTGGTGCTTTAAATGTTCCAATGCTTTTCACTGGCCACTCCCTTGGTAGGGATAAGTTAGAACAGCTTCTGAAGCAAGGTCGACTATCAAGGGATGAAATAAATTCAACATACAAGATTATGCGTCGGATAGAAGCTGAGGAATTAGCCCTTGATACTTCTGAAATAGTCATAACAAGCACTAGACAGGAAATAGAACAACAATGGCGTTTGTATGATGGCTTTGATCCCGTATTGGAGCGCAAAATACGAGCAAGGATCAGGCGTAACGTGAGTTGTTACGGTAGATTCATGCCTCGTATGGCGATCATTCCACCCGGTATGGAGTTCCATCACATAATTCCACATGATATAGAAAATGAGCCAGACGGAAGTTTGGATCATCCTGCCCCCCAAGATCCACCTATTTGGTCTGAGATAATGCGGTTCTTTACCAACCCTCGCAAGCCAATGATCCTTGCCCTTGCTAGACCAGACCCCAAAAAGAACATCACAACTTTGGTGAAAGCATTTGGAGAATGTCGTCCCCTACGAGACCTTGCAAATCTAACATTAATTATGGGTAACAGAGATGGCATTGATGAAATGTCGAGCACAAATGCCTCTCTTCTTCTCTCCGTCCTTAAGCTTATTGACAAGTATGATTTGTATGGGCAAGTGGCATATCCAAAACACCACAAACAATCTGAAGTACCTGACATATATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATCAATCCAGCTTTTATTGAGCCATTTGGTCTTACCTTGATTGAGGCAGCTGCTTATGGTTTGCCAATTGTTGCAACGAAAAATGGAGGTCCTGTTGATATTCATAGGGTACTTGACAACGGTCTACTTGTGGATCCCCATGATCAGCAGTCTATTTCAGATGCTCTTTTGAAGCTTGTTAGCAACAAGCAATTATGGGCAAAATGTAGACAGAATGGGTTGAAGAATATTCATCTTTTTTCATGGACTGAGCATTGCAAGACTTATCTGTCTAAAATAGCCACTTGCAAACCAAGATATCCGCAATGGCTGCGAAATGATGATGGAGCTGAAAGTTCTGAATCGGAATCACCAAGTGATTCCTTGAGAGATATACATGATTTATCTCTAAACCTGAAGTTCTCATTGGATGGAGAGAAGAGTGGAGGTAGTGGAAATGACAATTCCATGGAGTCTGATGGAAATACAGCTGATAGAAAAACTAAACTGGAGAATGCTGTGTTGTCATGGTCAAAGGGCATGTCCAAGGACACACGGAAAGGTGGAGCTACAGAAAAGTCAGATCACAATACAAATGCTGGTAAATTTCCACCACTGAGGAGGAGGAAGCATCTGTTTGTCATTGCAGTGGACTGTGATACTACTGAAGGTCTTCTTGAAACCATTAAAGTGATATTTGAGTCTGCAGAAAAGGAGAGGGCTGAAGGCTCTGTTGGGTTCATTTTGGCAACATCCTTCACAATATCTGAGATACACTCATTCTTGGTCTCGAGTGGCTTGAGCCCTGATGATTTTGATGCTTATATTTGCAACAGTGGCAGTGATCTTTACTATCCATCCCTCACTTCTGAAGATCGTGCCTTTGTGGTTGACTTGTATTATCACTCACACATTGAATACCATTGGGGTGGGGAAGGGCTGAGGAAGACTTTGGTACGCTGGGCAGCATCAATAACTGATAAGAAGGATGAGATTGAGGAGCAAATAGTGTTTCCTTCGGAGCAGCTTTCTACTGACTATTGTTATGCTTTCAAGCTGCAAAAGCAGGGAAAGGTTCCCCCTTTGAAGGAGCTCCGGAAGCTTCTGAGAATCCAGGCTCTACGTTGTCATGTTATTTATTGTCAAAATGGCACAAGGATGAACGTAATTCCAGTGCTGGCATCTCGTTCCCAAGCCCTCAGGTACCTTTACGTTCGATGGGGTTTTGAACTGTCGAAGATGGTGGTGTTTGTGGGAGAATGTGGCGAGACTGATTATGAGGGACTGCTTGGCGGTCAACACAGAAGTGTTATACTGAAGGGAGTTGGTAGTAGCGCAATCAGCCAACTCCATAACAACAGAAACTATCCTCTATCAGATGTCATTGCACTGGACAGCCCCAACATTGCTGAGGCTAGTGATGGTAGCAACGGTGCTGATATCCGATCCCTGATAGAAAACGTAGGATTTCACAAGGACCGAGTATAG 3174 0.4427 MAGNDWINSYLEAILDVGPGIDDAKSSLLLRERGRFSPTRYFVAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRFNKRHLERERGRREATADMSEDLSEGEKGDPVSDVSAHGDSTRGRLPRISSADSMETWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPIEMLTPRNQDDLTDDRGESSGSYIIRIPFGPRDKYIPKEHLWPYIPEFVDGAVGHIIQMSKALGEQIGGGHAVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINSTYKIMRRIEAEELALDTSEIVITSTRQEIEQQWRLYDGFDPVLERKIRARIRRNVSCYGRFMPRMAIIPPGMEFHHIIPHDIENEPDGSLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRDLANLTLIMGNRDGIDEMSSTNASLLLSVLKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSISDALLKLVSNKQLWAKCRQNGLKNIHLFSWTEHCKTYLSKIATCKPRYPQWLRNDDGAESSESESPSDSLRDIHDLSLNLKFSLDGEKSGGSGNDNSMESDGNTADRKTKLENAVLSWSKGMSKDTRKGGATEKSDHNTNAGKFPPLRRRKHLFVIAVDCDTTEGLLETIKVIFESAEKERAEGSVGFILATSFTISEIHSFLVSSGLSPDDFDAYICNSGSDLYYPSLTSEDRAFVVDLYYHSHIEYHWGGEGLRKTLVRWAASITDKKDEIEEQIVFPSEQLSTDYCYAFKLQKQGKVPPLKELRKLLRIQALRCHVIYCQNGTRMNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGETDYEGLLGGQHRSVILKGVGSSAISQLHNNRNYPLSDVIALDSPNIAEASDGSNGADIRSLIENVGFHKDRV 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1198 1057 CDD GT4_sucrose_synthase 167 660 - -
Alju13g1198 1057 MobiDBLite consensus disorder prediction 94 133 - -
Alju13g1198 1057 NCBIfam sucrose-phosphate synthase 1 1050 IPR012819 GO:0005985|GO:0046524
Alju13g1198 1057 Gene3D Glycogen Phosphorylase B; 432 650 - -
Alju13g1198 1057 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1050 - -
Alju13g1198 1057 FunFam Sucrose-phosphate synthase 1 432 650 - -
Alju13g1198 1057 Pfam Sucrose-6F-phosphate phosphohydrolase 776 1004 IPR006380 -
Alju13g1198 1057 Coils Coil 75 95 - -
Alju13g1198 1057 Pfam Glycosyl transferases group 1 469 643 IPR001296 GO:0016757
Alju13g1198 1057 MobiDBLite consensus disorder prediction 742 765 - -
Alju13g1198 1057 Gene3D Glycogen Phosphorylase B; 168 662 - -
Alju13g1198 1057 MobiDBLite consensus disorder prediction 705 727 - -
Alju13g1198 1057 CDD HAD_SPS 774 1004 IPR035659 -
Alju13g1198 1057 MobiDBLite consensus disorder prediction 94 146 - -
Alju13g1198 1057 Pfam Sucrose synthase 252 434 IPR000368 GO:0005985|GO:0016157
Alju13g1198 1057 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1198 Alju-ChrAlju13 30681118 30687101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1198 1 1042 Glycosyltransferase AT5G20280 76.291 0.0 1640