Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1196 ATGGCTATCCTTACATTATTCTTGACGCTATTGCTGCAACTGCCTTGCATTTTCGCCACTGGTTCTTTCTTACACTCAACTGATTGTGGTCCTAATTGGGTAGCCTACTCATATTCACTTGGCGAAGAATTTTATTCCATAAACGGGAATATAGTGGACAAAGTTACTTTCTGCAAGACCCTCCAACTGTATATTGCAAATGGTTGTGATTTGAAGGACTACTTTGAAAGTAGCAACTGTGCCTTGGATGTTGTTGCAGTTAATTCACCTTCAAAGGCAGGAAGAAAACTTCTGCAGAAGGATTTAAACAATAATTCCACATCTCAATCTCACCAAAATGTTTCAAAGAATGTGTCATTATCTCATGTTGGGATTGCTCCACATGTTGGGATTGCTGCATGTGGAGCTTTCTTGGTATGTTGTGGAGCTATCTGTCCTTGTATCTATGGGAAGAGACAAAAAGCCACTACTCATGCTGATTTGACCAAGGACACACATTCAATTGATTCGGCTTCCCCCTTTGAAGTAAATGCTGTTTCTGAAAAGGTGCCTGCAAGTCCACTTCGTGTGCCACCTAGTCCTTCAAGATTCTCATTGTCCCCAAAACTCAGTAGAATTGGGTCATTACATCTTAACTTGAGTCAAATTATAAGAGCTACCCATAATTTCTCAGATACTTTACGAATAGGAGAAGGTGGTTTTGGAACCGTCTACAGGGCTCAGCTCGAAGATGGATTGGTTGTGGCTGTGAAACGTGCAAAAAGGGAACTTTTTGAGACGTTGAGAACTGAATTCAGCAGTGAGGTTGAAATCCTGGCCAAAATTGATCACCGAAACTTGGTGAAGCTACTAGGTTACATTGACAAAGGAAATGAACGCCTTCTTATTACTGAGTATGTGGCAAATGGTTCTCTTAGAGAACATTTGGATGGTCTACGTGGAAATATCCTAGATTTCAATCAGCGCCTTGAAATTGCTATTGATGTTGCTCATGGATTGACCTATCTGCATACATATGCAGAAAAGCAGATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTAACAGAAAGCATGAGAGCTAAAGTTGCAGATTTTGGATTTGCAAAGCTCGGTCCCACAAACTCCGATCAGACACACATTTCAACCAAAGTGAAAGGAACAGTTGGTTATTTGGACCCTGAGTACATGAAAACATACCAACTCACTCCCAAGAGTGATGTTTACTCATTTGGTATTTTGCTCCTAGAAATTGTGTCAGGCCGCCGGCCGGTGGAGTTGAAGAAACCAGTTGAAGAGCGGGTTACATTACGATGGGCGTTCAAGAAGTTCCATGAAGGAAATGTGGTGGCACTGCTGGATCCTGCAATGAGGGAAAGTGTAAATACAGAGGTTGTCATGAAGATGATTGAGTTGGCATTTCAATGCGCAGCCCCAGTCCGAGCGGATCGACCCGGCATGAAATCAGTGGTCCAGCAATTGTGGACCATAAGAGCAGAATACCTCAAGGGTGCAAGGAGATCATAG 1530 0.4235 MAILTLFLTLLLQLPCIFATGSFLHSTDCGPNWVAYSYSLGEEFYSINGNIVDKVTFCKTLQLYIANGCDLKDYFESSNCALDVVAVNSPSKAGRKLLQKDLNNNSTSQSHQNVSKNVSLSHVGIAPHVGIAACGAFLVCCGAICPCIYGKRQKATTHADLTKDTHSIDSASPFEVNAVSEKVPASPLRVPPSPSRFSLSPKLSRIGSLHLNLSQIIRATHNFSDTLRIGEGGFGTVYRAQLEDGLVVAVKRAKRELFETLRTEFSSEVEILAKIDHRNLVKLLGYIDKGNERLLITEYVANGSLREHLDGLRGNILDFNQRLEIAIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPTNSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVSGRRPVELKKPVEERVTLRWAFKKFHEGNVVALLDPAMRESVNTEVVMKMIELAFQCAAPVRADRPGMKSVVQQLWTIRAEYLKGARRS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1196 509 SMART serkin_6 223 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1196 509 CDD STKc_IRAK 229 495 - -
Alju13g1196 509 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 300 509 - -
Alju13g1196 509 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Alju13g1196 509 SUPERFAMILY Protein kinase-like (PK-like) 205 498 IPR011009 -
Alju13g1196 509 Gene3D Transferase(Phosphotransferase) domain 1 300 507 - -
Alju13g1196 509 Pfam Protein tyrosine and serine/threonine kinase 228 495 IPR001245 GO:0004672|GO:0006468
Alju13g1196 509 ProSiteProfiles Protein kinase domain profile. 223 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1196 509 Gene3D Phosphorylase Kinase; domain 1 196 299 - -
Alju13g1196 509 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 195 299 - -
Alju13g1196 509 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 97 500 - -
Alju13g1196 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1196 Alju-ChrAlju13 30657921 30662625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1196 129 495 Receptor kinase-like Gene Family AT3G46290 40.270 1.23e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Alju13g1196 PK_Tyr_Ser-Thr 6.4e-52 CL0016