Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1187 ATGTTAGTGGTGCCCCTTTACAATTACTACGTTCCAAACACACCCTTGGTTCATAGCTTCGATTCACTCACTCTCATTTACCCTATTTTCACAAGAGGCCCCAATTCTAGGTTTTTCTGTGCATCTGAATCTCTTTTCAGAGACCCTTCTCTAGCTGTGGAAATGGTGAAGGGGAAGCTTATACTGATCAGCCAATCTGGTGGTGAATTTTTGACAAATGATGATGGATCTATGTCATATGCTGGAGGCGAAGCACATGCAGTGGAGATTAATCATGAAACAAGTTTTGACGATCTCAAGCTAAAACTTGCTGAACAATGGAATTTACAAATTAAGACCTTGTCCATAAAGTATTTTCTTCCAGGGAACAGGAAAACTTTAATCTGTGTATCAAATGATCGAGACCTGAACAGGATGAAAGAATTTTATGTAGATTCAATTACTGCTGAAGTTTTTATTTCTGGTAAAGAAGGCTTTGACCAGGAATCCTTAAACATGAATACCAGGATAAATGATATAAATGTAGCTGAAGCTGTGACCCCTGCCAATCTTTCAAAAAAGAAATCCAAAACTGTTCGCAAACAAAAAGCATCAGCTGGCACTTCTGCAAATCGTTCTCCACATCATGCTGTTACTAATAATCATGGTGCTGCCTGTTCTGGTCCACCTGGTTGTGTCGCCATCACCACTGATACATCCTCCCATGGTGGAATCTTAAGTGATATGGATGCTAGTCCTGCAGATGCAGTTAAGAAGCGAAGGCGTGCTGCATCTCTTGCAGTTACTGCAAGTGGTCCTACAATTAAAGCAGTATCTGGAGAAAGTAATAAAGTGATGTCACGGAAAAAGAATAAGAAAAATCATGGTGCTGCTGCTGCTGATAACGGAGAACACCAACTAGATTTTCTATTTAATGACGATTCTGACAATTTACTTGATGTCGTATCTGATATAACTCCAGGGAAATTAGCCGAATGTTGGAAACACAGTATTACTGGTGTTGGACAGGACTTTAGAAGTGTCCAAGAATTTCGTGACGCGTTGCAGAAATATGCCATTGCGCATCATTTTGCATATAGGTATATCAAGAATGACACAATTCGTGCCAGAGCCAGATGTGCATGTGAAGATTGTCCATGGAGGATTTTTGCTTCATGGGTCCCAGCCGCTGAATCATTTAGAATTAAAAAGATGGAGGAGCCACATACTTGTGGGGGAAAATCTTGGAAGTCTACTCATCCCTCAAAGAACTGGTTGGTAAATGTCGTAAAGGACAGATTACGAGATAACCTGCATCACAAAACAAAGGAGATTGCTAGTGGCATTCACCGAGACTTTGGGATTAAGGTGAATTACTCTCAAGTATGGCGTGCAGTTGAGGAAGCTAGGGAACAACTGCAAGGTTCATACAGAGAGGCGTACAACCAGTTGCCTAGGCTTTGTGAGAAGATGTTAGAGTCAAATCCTGGAAGCCGTATCAAGCTCATCACAAGTGAGGACAAAAGATTTCAGCATCTTTTTTTGTCCTTTCATGCTCTGATAGAAGGATTTCAGGCTGGTTGCCGCCCTCTTCTATTCCTTGATTCTACACCTTTGAAATCAAAATATCATGAGGTTTTATTGACAGCTACTTCTCTAGACGGTGATGATGGTGCTTTCCCTGTTGCACTGTGTATAGTTGATGTTGAGAATGATGATAACTGGAATTGGTTTTTGGAGCAGTTGAAGCTTACAATACCGACTTCCCAGCCCTTGACTTTTGTGTCTGACTGGGAGAAGGAGTTAAAGCAAACAGTTCTAAATGTATTCGAAAATGCCCACCATGGTTATTCCATGTGCCACCTTCTAGACAGCTTCAAGAAAAGTCTGAGGGGTCCTTACCATGGGGAAGGTAGGCCTTCTTTGCCAGTTAATTTTCTATCTGCTGCGCACGCGCTGCGGCTCGATGGTTTTAAAATGTTCTTGGAACAGATTAGAAAGGTCTCTACAGCAGCATATGATTGGGTCATGGAAGTTGAACCAGAGCAATGGGCAAGTGCAGTATTCAAAGGTGAGCGATATAATCATATTCTTGTAGACGTTGCTGAGTTATACACCATGTGGATCGAAGAAGTGCGAGAGCTACCCATAACACAAAAGGTCGAAGCACTTAGATGTAAGATCATGGAGTTAATAGACAACCGTCGAGCGGCTTCGAGTAGTTGGACATCGAGACTGACTCCATCAAAGGAAGAACTGGTACTAGATGAATCCCTCAGGGCACAGGGCCTTAAAGTCTTGTTCTCATCGGACACCTTGTTCGAGGTTCATGACGATTCTGTCCGTGTCGTTGATATCGAAAAGTGGGATTGTAGCTGTTTGAGATGGAAAGCAACAGGACTGCCATGTTGCCATGCTATAGCTGTCTTGAATTGCACACGTCGAAGTGTATATGACTACTGTGTGAAATACTTCACTGCTGATAACTTCCATCACACGTACTCTGAATCCATAAATCCTGTCTCTGATTATTTATCCATAAATCCTGCTTCTGATGATTTGAACCATATCGAGGAAGCCAAGCAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGCGGAGACTGAGACTGAGAGTAATGTACTTCCTCCTTGCAATTCAAGACCTTACGGCCAAAATAAGAAAGATGAGAATAAAACAGCAAAGAAATCTAGGAAGACTGTTACTTGTACCAAGTGCAAAGGAAGAGGCCATAATAAGGCTACTTGTAAAGAGAAACGGTGA 2763 0.422 MLVVPLYNYYVPNTPLVHSFDSLTLIYPIFTRGPNSRFFCASESLFRDPSLAVEMVKGKLILISQSGGEFLTNDDGSMSYAGGEAHAVEINHETSFDDLKLKLAEQWNLQIKTLSIKYFLPGNRKTLICVSNDRDLNRMKEFYVDSITAEVFISGKEGFDQESLNMNTRINDINVAEAVTPANLSKKKSKTVRKQKASAGTSANRSPHHAVTNNHGAACSGPPGCVAITTDTSSHGGILSDMDASPADAVKKRRRAASLAVTASGPTIKAVSGESNKVMSRKKNKKNHGAAAADNGEHQLDFLFNDDSDNLLDVVSDITPGKLAECWKHSITGVGQDFRSVQEFRDALQKYAIAHHFAYRYIKNDTIRARARCACEDCPWRIFASWVPAAESFRIKKMEEPHTCGGKSWKSTHPSKNWLVNVVKDRLRDNLHHKTKEIASGIHRDFGIKVNYSQVWRAVEEAREQLQGSYREAYNQLPRLCEKMLESNPGSRIKLITSEDKRFQHLFLSFHALIEGFQAGCRPLLFLDSTPLKSKYHEVLLTATSLDGDDGAFPVALCIVDVENDDNWNWFLEQLKLTIPTSQPLTFVSDWEKELKQTVLNVFENAHHGYSMCHLLDSFKKSLRGPYHGEGRPSLPVNFLSAAHALRLDGFKMFLEQIRKVSTAAYDWVMEVEPEQWASAVFKGERYNHILVDVAELYTMWIEEVRELPITQKVEALRCKIMELIDNRRAASSSWTSRLTPSKEELVLDESLRAQGLKVLFSSDTLFEVHDDSVRVVDIEKWDCSCLRWKATGLPCCHAIAVLNCTRRSVYDYCVKYFTADNFHHTYSESINPVSDYLSINPASDDLNHIEEAKQEEEEEEEEEEAETETESNVLPPCNSRPYGQNKKDENKTAKKSRKTVTCTKCKGRGHNKATCKEKR 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1187 920 Pfam PB1 domain 77 145 IPR000270 GO:0005515
Alju13g1187 920 PANTHER POLYPROTEIN, PUTATIVE-RELATED 327 845 - -
Alju13g1187 920 MobiDBLite consensus disorder prediction 195 212 - -
Alju13g1187 920 Coils Coil 840 874 - -
Alju13g1187 920 MobiDBLite consensus disorder prediction 898 914 - -
Alju13g1187 920 SMART 26again6 782 809 IPR006564 GO:0008270
Alju13g1187 920 MobiDBLite consensus disorder prediction 184 212 - -
Alju13g1187 920 ProSiteProfiles Zinc finger SWIM-type profile. 775 807 IPR007527 GO:0008270
Alju13g1187 920 SUPERFAMILY CAD & PB1 domains 74 146 - -
Alju13g1187 920 Pfam SWIM zinc finger 773 805 IPR007527 GO:0008270
Alju13g1187 920 MobiDBLite consensus disorder prediction 852 870 - -
Alju13g1187 920 MobiDBLite consensus disorder prediction 852 920 - -
Alju13g1187 920 Pfam MULE transposase domain 525 616 IPR018289 -
Alju13g1187 920 Pfam MuDR family transposase 331 395 IPR004332 -
Alju13g1187 920 SMART PB1_new 73 154 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1187 Alju-ChrAlju13 30594299 30602253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1187 50 143 MAP Kinase Kinase Kinase AT1G79570 33.333 6.27e-06 48.5