LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g1175	ATGGCGAATCTGAAAGTAGGTAGTCGACCGCCATGGGTGGGGCTTGGAGCTGCCGTTTGGATTCAAATAGCTTCTGGAAACGCCTCCACTTTCCCTCTCTACTCTCACTCTCTCAGATCTATTCTTGGTTTTAACCAGCGACAGATTGCCTTGCTCGGTGTCGCCAACGATATTGGCGAGAACGTTGGTCTTCTTCCTGGTATCGCCTCCAACAACTTCCCTCCCTGGCTCATTCTCTCCCTCGGCGCTCTTCTCTCTTTTCTTGGCTATGGCCTCCTCTGGCTCTCTCTTAGTCGCACTCTTCTCTCTCTTCCCTTCTGGCTGTTATGGATTGCTTCAGTTGTTGCCACCAACAGTGCTACATGGTTATCCACAGCTGTTCTTGTCACTAACATGAGAAACTTCCCTGTGAGTAGAGGCACAGTCGCCGGAATCCTTAAAGGCTACGGAGGTTTAAGTGCTGCGGTTTTCACTGAAATTTACAGCCTAATTATTCACAATTCTTCCTCTAAGTTCCTCTCGTTCCTTGCCCTTGGTATTCCTATTACATGTTTCACCTTGATGTTTCTTGTCAGGCCGTGTACTCCTGCTTCTGGCGAAGACTCCTCAGAAAATAACCATTTTGTCTTCATCCAAGCCTCTAGTGTTGTCCTAGGTTTATACCTTCTTGCAACCACAGTACTTAACCATGTTTTCTCCTTAAGTGATATAGTGTCCTACGTTTTGGTCTTTGTGATGATCTTGCTCCTAATGGCTCCTCTTGCTGTCCCTATAAAGATGACATTGTTTCCCAGAAAAGCCATCAAACCAGAGGAAGCTGAGGCACAAGCAGGATCTTCTGAGCATGCTGAGAAGTCAGAACCTTTGTTGCTTGAGGCATCTCCATCATCATCAACACTTGGGAGTTTTTATGACAATGATGAGTCATCTGAAGTGGCTATGCTTCTTGCTGTGGGTGAAGGAGCAGTGAATAAGAAGAGGAGGAGGCCTAAAAGAGGGGAAGATTTTAACTTTCGCGAGGCAGTGGTTAAAGCTGATTTTTGGCTTTTGTTTCTGGTTTTCTTTGTTGGTGTAGGAACTGGGGTTACTGTGGTAAACAACCTAGCACAGATTGGGATCGCACAAGGTGTGGAAAATACTACAATCTTGTTGTCCACTTTTAGCTTCTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGAACAAAAACAATCCCAAGAACAGTGTGGATGACATGTACGCAGATAATAATGATCATCTCGTACCTGTTGTTTGCATATGCTGTGAGGGGAACCCTTTATCCTGCAATAGCATTTCTGGGAATCTGCTATGGTGTGCAGGTTTCTGTAATGGTTCCAACTGTTTCCGAGTTATTTGGCCTCAAACACTTTGGCCTTCTCTACAACTTCATGAGTTTGGGAAACCCTATTGGCGCCTTCCTTTTCTCTGCTCTCTTAGCCGGCCATGTCTATGACGCTGAAGCAGACAAGCAGCATAGTCTGAGCCATCTGGTACATGACTCTATATCTAAGGCCTGCGTGGGAGCCTCTTGCTTTAAGCTAACCTTTTTGGTTCTGGCTCTTGTGTCTGCTGTTGGCGCCCTCTTGAGCATTATTTTGACTGTGAGGGTGAAACCTGTTTATCAAATGCTTTATGCTGGTGGTTCTTTTAGGCTTCCCCAGTCTTCTTCAAGCCATTAA	1719	0.4561	MANLKVGSRPPWVGLGAAVWIQIASGNASTFPLYSHSLRSILGFNQRQIALLGVANDIGENVGLLPGIASNNFPPWLILSLGALLSFLGYGLLWLSLSRTLLSLPFWLLWIASVVATNSATWLSTAVLVTNMRNFPVSRGTVAGILKGYGGLSAAVFTEIYSLIIHNSSSKFLSFLALGIPITCFTLMFLVRPCTPASGEDSSENNHFVFIQASSVVLGLYLLATTVLNHVFSLSDIVSYVLVFVMILLLMAPLAVPIKMTLFPRKAIKPEEAEAQAGSSEHAEKSEPLLLEASPSSSTLGSFYDNDESSEVAMLLAVGEGAVNKKRRRPKRGEDFNFREAVVKADFWLLFLVFFVGVGTGVTVVNNLAQIGIAQGVENTTILLSTFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIIMIISYLLFAYAVRGTLYPAIAFLGICYGVQVSVMVPTVSELFGLKHFGLLYNFMSLGNPIGAFLFSALLAGHVYDAEADKQHSLSHLVHDSISKACVGASCFKLTFLVLALVSAVGALLSIILTVRVKPVYQMLYAGGSFRLPQSSSSH	572

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g1175	572	Gene3D	MFS general substrate transporter like domains	342	555	IPR036259	-
	Alju13g1175	572	SUPERFAMILY	MFS general substrate transporter	236	552	IPR036259	-
	Alju13g1175	572	SUPERFAMILY	MFS general substrate transporter	11	195	IPR036259	-
	Alju13g1175	572	Pfam	Major Facilitator Superfamily	352	549	IPR011701	GO:0022857\|GO:0055085
	Alju13g1175	572	CDD	MFS_Mch1p_like	10	540	-	-
	Alju13g1175	572	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	12	555	-	-
	Alju13g1175	572	Pfam	Nodulin-like	11	258	IPR010658	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g1175	Alju-ChrAlju13	30492854	30495356	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g1175	5	572	Nodulin-like Gene Family	AT1G80530	55.810	0.0	659