Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1166 ATGGCAAGTAATGGTACTGAGAAAATACCTATCTATGATGATACTGAAGGTTCAGAAGCTGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACACTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAGATTGCTTCTGTAACTGGAGTGTTGTCAGAGCGGCAGCGCCTAATTTGTCGAGGAAAAGTTCTAAAGGATGATCAACTCCTTTCTGCCTACCATGTTGAAGATGGTCATACCTTGCATCTTGTTGTGAGGCAACCTGATCTACCTGGAAGTTTGCCCAATCAATCAGTACCTGACCCACATTCAAGCACAAACAGTAGTCAAATAGCTCCTGGCGTTTTTATTGAAACTTTCAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGCAGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTAGTGGTATATCAGATTCATTTTATCCTCAACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATCACGCAGTGCATTTGGACTTCCAACAGCAGCAGCTTCTTTGGGATCATTACAGCCCCCTGTCATTCCTGATTCTTTGACAACTTTGTCTCAGTACGTGAGTCATCTAAGGCATGAATTTGAAGCCATTGTGAGAGAAGGGGGAAATAGCACCCAAGCAGCTGAGGCTCATAGGAATGAAGCATCGATTTCTTCTTCACCTTCAGGCTCTACACCAGAAGGGCTTTTGTCACCTACGTACTTGGCGGAAGTCTTGCATTCTACCAGACGGATGTTCGTTGAACAGGCTAACGAGTGCTTATTTCAACTTGCAACACAGCTTGAGAATCAAGCAAATGTAACTGATCCCTTGTTGCGGTCAAACATTCAGTCCAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCATTTTTACTCGAGCTTGGTCGGACGACCATGGCATTGCGTTTGGGTCAAACACCATCTGAAGCTGTAGCTAATGGGGGGCCAGCAGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCTAGCTTTGGTTCTGCACCTGTTGGAACTGTGCAGTCCCCGTCTGGTTTAGGTAGTGGACTTGGTTCAAGTTTTTACCCAAGGCGTATAGATATTCAGATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAACATGGGGATACACAATCTGCTTCAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAGACAAGCTCGAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGGCTTTACTATCCTGTTATTGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGAATCAGGATCTCAGCCTGCTAGTCAGCATCATGCGTCTGCTTTTCATGCAGCTCAACAGTCAACACCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCGTCAACTCCTAGCTTAAGACAAGAGCCATCTAATACCCGCAGGGTGAACATCAATGTTCTGACGGCTGGTGGACTCCAGAGCAGCCAAGAATCTGAGAGGCAGATACCCAATAATGTACTTCAATTTATAAGAGCACTTTTTCCTGGTGGTGAAATTCATGTTGAAGATCCTAGTCCACAGGGAACGACTGGTGCTCCTACCCCGGATCATGCTGGAACATCAACAGGTGCTGCTTGTGTCCCTGAGTCAGAGCCCAGAGCTAGTGAGGAAGGAATATTTTTGTCTAATTTACTCCGAGAGGTCATGCCCCTCATATCACAAGCAGGGTCTGGGACGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCTCCCAGGGTGGGACGCCACGGAGACAAAGTGATTCTGATCCAAGCCCTCCAAATTCTAAACGCCAAAAGACGGAGTGA 2160 0.4519 MASNGTEKIPIYDDTEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSVPDPHSSTNSSQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGSEGIDVRGHDSRGLGRTSGSSGISDSFYPQPEQAGLRNSSDRSRSAFGLPTAAASLGSLQPPVIPDSLTTLSQYVSHLRHEFEAIVREGGNSTQAAEAHRNEASISSSPSGSTPEGLLSPTYLAEVLHSTRRMFVEQANECLFQLATQLENQANVTDPLLRSNIQSRAWRTGVLFYNLGAFLLELGRTTMALRLGQTPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGASFGSAPVGTVQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSANVNREEHGDTQSASVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSESGSQPASQHHASAFHAAQQSTPESTGQRQSMDDPARNGSSSTPSLRQEPSNTRRVNINVLTAGGLQSSQESERQIPNNVLQFIRALFPGGEIHVEDPSPQGTTGAPTPDHAGTSTGAACVPESEPRASEEGIFLSNLLREVMPLISQAGSGTHGTPQGENASDNQTASDSSSQGGTPRRQSDSDPSPPNSKRQKTE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1166 719 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 15 718 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 614 651 - -
Alju13g1166 719 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Alju13g1166 719 CDD Ubl_ubiquitin_like 24 91 - -
Alju13g1166 719 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Alju13g1166 719 MobiDBLite consensus disorder prediction 98 115 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 425 450 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 249 275 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 94 115 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 173 204 - -
Alju13g1166 719 SUPERFAMILY Ubiquitin-like 17 100 IPR029071 -
Alju13g1166 719 Gene3D - 15 106 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 517 577 - -
Alju13g1166 719 SMART ubq_7 22 93 IPR000626 GO:0005515
Alju13g1166 719 MobiDBLite consensus disorder prediction 162 204 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 253 275 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 515 577 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 668 719 - -
Alju13g1166 719 FunFam Large proline-rich protein BAG6 14 106 - -
Alju13g1166 719 MobiDBLite consensus disorder prediction 671 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1166 Alju-ChrAlju13 30389480 30396648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1166 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 2.83e-08 51.2