Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1144 ATGACCTTTGTATTCATTTGGAATATATATTTATACACATCATGTGTTTCCTCAATTAATGCAACTTTTTTGGGATTTTTATTCAATGGCTGAGGATCTTTTGCAGGAGGAGGTGGTGTGGCTAAAGAGAGGGCAAATCAGTACAAAGGAAAGGTTACACCTTATGTGGTAATTGCTTGTATTGTTGCTGCCACTGGTGGCTCCCTCTTCGGCTATGATATTGGAATCTCAGGTGGGGTTACTTCCATGGATGATTTTCTTAAGGATTTCTTCCCCACAGTGTACAGTCACAAGAGGCACGCACAAGAAAACAACTACTGCAAATACAACAACCAAGGCCTCGCAGCTTTCACCTCTTCTCTTTACCTTGCTGGTTTAGTTGCATCTCTCCTGGCTTCTCCGGTCACCAGAAAGTACGGCCGGCGAGCCAGTATCATCGCCGGTGGTATCAGCTTCCTCATTGGATCAGCCCTTAATGCCTCAGCTGTTAATCTCGCAATGCTTCTCTTAGGTCGAATCATGCTAGGTGTTGGTATTGGATTTGGAAATCAAGCTATTCCTCTGTATTTGTCGGAGATGGCACCGACCCACCTGCGAGGAGGTCTGAACATGATGTTTCAGGTAGCTACAACATTTGGGATTTTTACAGCAAACATGGTAAATTATGGGACACAGAAGATTACACGATGGGGATGGAGATTATCTCTAGGATTAGCAGCAGTACCAGCTCTGTTAATGACAGTGGGAGGGATATTTCTTCCTGATACACCAAACAGCTTAATAGAAAGAGGATTAAAAGAGAAAGGAAGGAAGCTTCTAGAAAAAATCAGAGGGACAAAAGATGTTGAAGCAGAGTTTCAGGACATGATCGAAGCGAGCGAGTTTGCTGAGTCGGTGAAACACCCTTTCCGGAATATACTGGAAAGGAAGTACCGGCCGGAGTTGGTGATGGCCATTTTCATGCCGGCGTTTCAGATTCTGACGGGGATAAATACGATTCTGTTCTATGCTCCTGTGTTGTTTCAGAGTATGGGGTTCGCCGGAGATGCGTCGCTGTACTCGTCGGCGACGACCGGTGGGGTTCTTGCTTTCTCCACCTTCATTTCCATTGCAACAGTAGATAGGTTGGGAAGGAGGCCTTTGCTTATCAGCGGTGGGGTCCAAATGATTACGTGTCAGATAATTGTGGCCACAATCCTGGGAATCAAATTTGGAAATAACCAACATCTATCCAAAAGCTATTCAATATGGGTTGTCGTTGTGGTATGTCTATTTGTGTTAGCTTTTGGATGGTCATGGGGCCCACTTGGGTGGACAGTGCCAAGTGAGATATTTCCATTAGAGATCAGATCAGCAGGCCAAAGCATAACAGTTGCTGTAAATCTTCTATTCACATTCATAGTTGCTCAAGCTTTTCTTTCTCTACTGTGTGCTATGAGGTTTGGTATCTTCCTCTTCTTTGCTGGGTGGATCACATTAATGACTGTCTTTGTTTTCCTGTTCTTGCCTGAAACTAAGGGAATCCCCATTGAAGAAATGTCTCTCATGTGGAGGAGACACTGGTTCTGGAAAAAGATTCTCCCTACTGAATCAGAATCTCAAGTTTATGGATCCCAAGATGCCAAAATAAAGACTTCCATGGATTCATCTGATGGTGCAGCTTGA 1665 0.442 MTFVFIWNIYLYTSCVSSINATFLGFLFNGXGSFAGGGGVAKERANQYKGKVTPYVVIACIVAATGGSLFGYDIGISGGVTSMDDFLKDFFPTVYSHKRHAQENNYCKYNNQGLAAFTSSLYLAGLVASLLASPVTRKYGRRASIIAGGISFLIGSALNASAVNLAMLLLGRIMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFTANMVNYGTQKITRWGWRLSLGLAAVPALLMTVGGIFLPDTPNSLIERGLKEKGRKLLEKIRGTKDVEAEFQDMIEASEFAESVKHPFRNILERKYRPELVMAIFMPAFQILTGINTILFYAPVLFQSMGFAGDASLYSSATTGGVLAFSTFISIATVDRLGRRPLLISGGVQMITCQIIVATILGIKFGNNQHLSKSYSIWVVVVVCLFVLAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIVAQAFLSLLCAMRFGIFLFFAGWITLMTVFVFLFLPETKGIPIEEMSLMWRRHWFWKKILPTESESQVYGSQDAKIKTSMDSSDGAA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1144 554 PRINTS Sugar transporter signature 419 440 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 PRINTS Sugar transporter signature 442 454 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 PRINTS Sugar transporter signature 169 188 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 PRINTS Sugar transporter signature 67 77 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 PRINTS Sugar transporter signature 325 335 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 ProSitePatterns Sugar transport proteins signature 2. 174 199 IPR005829 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 Gene3D MFS general substrate transporter like domains 48 520 IPR036259 -
Alju13g1144 554 ProSiteProfiles Major facilitator superfamily (MFS) profile. 59 506 IPR020846 GO:0022857
Alju13g1144 554 SUPERFAMILY MFS general substrate transporter 51 513 IPR036259 -
Alju13g1144 554 CDD MFS_STP 62 504 IPR044778 GO:0015145|GO:0015749
Alju13g1144 554 ProSitePatterns Sugar transport proteins signature 1. 369 386 IPR005829 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 Pfam Sugar (and other) transporter 60 517 IPR005828 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 NCBIfam sugar porter family MFS transporter 48 513 IPR003663 GO:0016020|GO:0022857|GO:0055085
Alju13g1144 554 FunFam Sugar transport protein 13 49 520 - -
Alju13g1144 554 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 44 526 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1144 Alju-ChrAlju13 30211801 30215868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1144 32 534 Organic Solute Cotransporters AT4G02050 76.923 0.0 826