Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1141 ATGGAGATTTTTAAATGTTTCTACTTCAATCTCCTCCTTGTTTCCACTTTTTCCATTTTCTTCTTGGCTGTTTCAGCAATGGACCCTTATTCTGATGCACTCATAAGCCTGAAATCTGAACTTGTGGATGATGAAGACAGTTTAAGTGACTGGGTGGTTGAGCCTTCTGGAGGAAACTCAACTGGGAAATCCAATGCTTATTGCTGTTCTTGGACTGGAATCAATTGTGATAACAGCTCAAAAACTGTAACTTCTATAGACTTGTCCATGAAGAAACTGGGAGGTGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAGTATCTCAACCTCAGCCATAATTTCTTCTCTGGGCAACTTCCTGTGGGAATCTTCAACCTCACCAGTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCAGTTCCCAGTTGGTATCTCAAGCCTTAAAAACTTGCTTGTACTTGATGCTTTTAGCAACAGCTTTTCAGGATCATTGCCTGTTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATACGGTTCCTTCAGAAGCCTTGAGTTCCTTCATCTTGCAGGGAATCTTCTCTCTGGGAGTCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTTTATTCCACCTGAGTTAGGTAACATGAGTGAACTTAGGTATCTTGATATTGCTGGTGCAAATCTATCTGGTCCAATACCAAAGCAACTCTCCAATCTCACCAATTTGCAGTCACTTTATCTGTTCAGAAACCAGCTCATGGGATCAATTCCAAGTGAGTTTAGCAATATCAAGTCACTCACAGGTTTAGATCTTTCTGATAATTTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTGGAGAACCTGAGGCTGCTCAGTCTCATGTATAATGACATGAATGGCACTGTTCCTGAAGGCATTGCACAACTTCCAAACTTAGAAACGCTTCTTATTTGGAACAATGACTTCTCTGGTTCACTTCCACAGAGTTTAGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACAAGACATTTGTATGAGAGGAGTATTATATAAGCTGATTCTGTTTTCAAACAGATTCTCAGGTAGCCTCTCACCATCTCTCTCAAATTGTTCATCACTCGTTCGTCTTCGCTTGGAAGATAACCTGTTCACAGGGAATATCGCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACCTATCCAGGAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAGGCTATCAAGCTTACTTACTTCAATGTCTCCAATAATCCACAATTAGGAGGCACCATCCCTACACAAACATGGTCTTTGCCACTTCTGCAAAATTTTTCAGCCTCTTTCTGTGGTATTTCAGGAAAACTTCCCCCATTTGAGTCCTGCAAATCAGTCTCTAGCATTGACCTTGATAGAAACAACTTGTTTGGAACGATCTCTTTCACTATTTCAAATTGCAAAAATCTTGAGATCATAAAATTATCAAACAATAATTTATCTGGTCCTATACCTGATCAGCTTGCAAGCATCCCTGTCCTTGGTGTAGTAGACCTATCACGTAATAACCTCAGTGGTCCTATACCTGCAAAATTTCGCACTTCTTCAAGCTTACAAATTCTTAATGTGTCATTCAACTACATCTCCGGTTCGATTCCTGAAGGAAAGTTATTCAGATTCATGGATACCAGTGCATTTGTTGGGAATCCAGAGCTATGTGGAGCACCTCTACGACCATGTTCGGATTCAGTAGGAATATTGGGAAGTAAAGGCACGTGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTTATATTCCTTCTTGCAGCATTCGCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATTTCATTTGTTGGTCTCCCTCAGTTCACAGCAAACGATGTTTTGACAAGCTTCAATACCACAGAATCAAGAGCAGTGGCAGCAAAACCATCACCTTCAGTTTCAAAAGCTGTTTTGCCAACTGGAATAACAGTTTTGGTGAAGAAGATTGAGTGGGAAAAGAGGAACATTAAAGTGGTGTCAGAGTTTATAATGAGATTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTACAACCAGAGTCTAGCTTATATGTTATATGACTACTTACCTAATGGGAACTTGGCTGAGAAAATTGGGATGAAAAGGGATTGGGAAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTCCTTCACCATGACTGTTACCCAGCCATACCACATGGAGACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCTCACTGGGCAGAATTTGGCCTCAAGCACGTGTTGAAGTTGAGCAAAGGTTCATCTCCTTCCACAACTTCTAGCTGGGAACCAGAATACAATGAAGCCATGAAAGAGGAATTCTACGCCGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGAAAAATGCAGCAGCTAGCATACAAAACAAACCAAGAGAGGTTCTTTTGAGAGAAATTTATGATGAAAATGATGTGAGTTCTGCCAGTTCATTGCAAGAGATCAAACTGGTTCTTGAAGTGGCTTTGCTTTGCACCAGAAGCAAGTCATTTGATCGCCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGGTCAAAGCCCCCAGAAGATCACAAATATTAA 2892 0.4049 MEIFKCFYFNLLLVSTFSIFFLAVSAMDPYSDALISLKSELVDDEDSLSDWVVEPSGGNSTGKSNAYCCSWTGINCDNSSKTVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGQLPVGIFNLTSLRSLDISRNNFSGQFPVGISSLKNLLVLDAFSNSFSGSLPVELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGSLPPELGNLKTVTHMEIGYNSYQGFIPPELGNMSELRYLDIAGANLSGPIPKQLSNLTNLQSLYLFRNQLMGSIPSEFSNIKSLTGLDLSDNFISGPIPESFSKLENLRLLSLMYNDMNGTVPEGIAQLPNLETLLIWNNDFSGSLPQSLGKNSNLMWVDVSTNNFVGSIPQDICMRGVLYKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGNIALKFRHLPDISYVDLSRNKFLGGIPSDISQAIKLTYFNVSNNPQLGGTIPTQTWSLPLLQNFSASFCGISGKLPPFESCKSVSSIDLDRNNLFGTISFTISNCKNLEIIKLSNNNLSGPIPDQLASIPVLGVVDLSRNNLSGPIPAKFRTSSSLQILNVSFNYISGSIPEGKLFRFMDTSAFVGNPELCGAPLRPCSDSVGILGSKGTWKLTSVVLLCAGLLIFLLAAFAFGIVYFRRGVKSQWKMISFVGLPQFTANDVLTSFNTTESRAVAAKPSPSVSKAVLPTGITVLVKKIEWEKRNIKVVSEFIMRLGNARHKNLIRLLGFCYNQSLAYMLYDYLPNGNLAEKIGMKRDWEAKFRIVIGIAKGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHWAEFGLKHVLKLSKGSSPSTTSSWEPEYNEAMKEEFYADVYKFGEMILEILTNGRLKNAAASIQNKPREVLLREIYDENDVSSASSLQEIKLVLEVALLCTRSKSFDRPSMEDALKLLSGSKPPEDHKY 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1141 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 196 299 - -
Alju13g1141 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Alju13g1141 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 318 632 - -
Alju13g1141 963 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Alju13g1141 963 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 179 946 - -
Alju13g1141 963 SMART serkin_6 713 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1141 963 SUPERFAMILY RNI-like 85 407 - -
Alju13g1141 963 Gene3D Ribonuclease Inhibitor 395 634 IPR032675 -
Alju13g1141 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 775 960 - -
Alju13g1141 963 SMART LRR_typ_2 105 129 IPR003591 -
Alju13g1141 963 SMART LRR_typ_2 345 369 IPR003591 -
Alju13g1141 963 SMART LRR_typ_2 273 296 IPR003591 -
Alju13g1141 963 SMART LRR_typ_2 201 225 IPR003591 -
Alju13g1141 963 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Alju13g1141 963 Pfam Leucine rich repeat N-terminal domain 32 77 IPR013210 -
Alju13g1141 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 689 774 - -
Alju13g1141 963 SUPERFAMILY L domain-like 314 628 - -
Alju13g1141 963 Gene3D Transferase(Phosphotransferase) domain 1 773 962 - -
Alju13g1141 963 FunFam Leucine-rich repeat receptor-like protein kinase 27 195 - -
Alju13g1141 963 Pfam Leucine rich repeat 84 142 IPR001611 GO:0005515
Alju13g1141 963 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Alju13g1141 963 Gene3D Ribonuclease Inhibitor 289 394 IPR032675 -
Alju13g1141 963 SUPERFAMILY Protein kinase-like (PK-like) 713 952 IPR011009 -
Alju13g1141 963 Pfam Protein tyrosine and serine/threonine kinase 721 950 IPR001245 GO:0004672|GO:0006468
Alju13g1141 963 Gene3D Phosphorylase Kinase; domain 1 678 772 - -
Alju13g1141 963 ProSiteProfiles Protein kinase domain profile. 654 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1141 Alju-ChrAlju13 30189897 30193421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1141 6 956 Receptor kinase-like Gene Family AT5G51350 55.509 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju13g1141 PK_Tyr_Ser-Thr 8.5e-19 CL0016