Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1138 ATGGCGTCTCAAAATCTGACTGAGTACGAACAGAAGCGACTCGAGAATATTCGCCGCAACGATGAAATGTTGGCGGCCCTTAAGATTCATTCCAAAGCCTCCGAGGTATCCGCCGCGGCCAAACGCTCAAGGGTTGCATCTAAATCTTACACTCTGAAATCTGAGAAGAAGCCTAAAACGGAAACCCCAGTGGTGATCCGACGGTCATTGCGAACCAGAGGTATGCCACCCGATTCCGAGGGTTTGAAGGACATCGCATTGGAATCAGTCAATGTGACTGAGAAATCACCAGCTAAAGTGCTGGGTCCTCTTTCAATGAGAGATGCTTACGAAGGGGATGATGAATTTGACAGCTCCTTCGTTGAAGCAATTGTGGGTTTGGCTAAGAAGAAAGCTCATTCCCGTTCTTTGAATGGAGAAGAAATTGGTAGCTGCGGAGATGGGGATGCTTCAAATGACTTGAAGGAAAGAAGCGTTGGGACTTCTTGTGATTTGGAATGGAGAAAGGAGGAATACAAGGTCTGGGGCTCGTTGAAGTTGGAATCGCTGACTTTAGATTCCGAGAACAGAGCAAGGCTTGTTCCAACAAGGATAACTGCTGTACAATTTTTTCCATCAAGCAATGTGAAGATGATCGTGGCAGGTGACAAATTTGGAAATCTTGGATTCTGGAATTGTGATTCTAGCAATAATGAAGGAAATGAAGTTCATTTATACCGCCCCCATCCAGCCGCCATTTCTGGGATCTTGGTTCAAAGACATTGCTTGTCGAAGATTTACACAAGTTGCTATGATGGATTGGTTCGCCTGATGGATGCAGAAAAGGAGGTTTTTGACCTGGTGTTTAACAGTGATGAAACTTTATACTCTCTCTCACAGCCAAACAATGATGCAAACTGCCTATATTTTGGCGAAGGTCCCGGAGGTTTGACCATTTGGGACAGCAGGACAGGGAAATGTTCATCCCGACGGGTTTTGCATGATAGTAGGATTAATACTATAGATTTCAACCCAGAAAACCTTCACATTATGGCAACTAGTTCCTCTGATGGAATTGCCTGCACCTGGGACTTGAGATACACTAAGAAGTCTAAGCCGAGTGCTCTGAGGACGTTTACTCACAAAAGGGCTGTGCACTCTGCTTACTTCTCGCCTTCTGGGCGTTCTTTGGCAACTACAAGCCTGGACGACACAATTGGTATATATGATGGAGCTAACTTCGAGAATGCATCGACTATGTACCACTTCAATCAGACTGGCAGATGGCTTTCTACCTTCAGAGGAATATGGGGCTGGGATGATTCCTATATCTTCGTTGGCAATATGAAAAGAGGAGTTGACGTGATCTCCCCTGTTCACAAGAAAATTGTAATGACCCTACAGAGTCCACACATTTCTGCCATTCCGTGCAGGTTTGATGCTCACCCTTCCGAGATTGGGACTCTTGCGGGAGCTACAAGTGGGGGACAGGTTTATGTGTGGACATCATCATAA 1494 0.4558 MASQNLTEYEQKRLENIRRNDEMLAALKIHSKASEVSAAAKRSRVASKSYTLKSEKKPKTETPVVIRRSLRTRGMPPDSEGLKDIALESVNVTEKSPAKVLGPLSMRDAYEGDDEFDSSFVEAIVGLAKKKAHSRSLNGEEIGSCGDGDASNDLKERSVGTSCDLEWRKEEYKVWGSLKLESLTLDSENRARLVPTRITAVQFFPSSNVKMIVAGDKFGNLGFWNCDSSNNEGNEVHLYRPHPAAISGILVQRHCLSKIYTSCYDGLVRLMDAEKEVFDLVFNSDETLYSLSQPNNDANCLYFGEGPGGLTIWDSRTGKCSSRRVLHDSRINTIDFNPENLHIMATSSSDGIACTWDLRYTKKSKPSALRTFTHKRAVHSAYFSPSGRSLATTSLDDTIGIYDGANFENASTMYHFNQTGRWLSTFRGIWGWDDSYIFVGNMKRGVDVISPVHKKIVMTLQSPHISAIPCRFDAHPSEIGTLAGATSGGQVYVWTSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1138 497 SUPERFAMILY WD40 repeat-like 195 495 IPR036322 GO:0005515
Alju13g1138 497 SMART WD40_4 453 495 IPR001680 GO:0005515
Alju13g1138 497 SMART WD40_4 232 272 IPR001680 GO:0005515
Alju13g1138 497 SMART WD40_4 317 357 IPR001680 GO:0005515
Alju13g1138 497 SMART WD40_4 365 403 IPR001680 GO:0005515
Alju13g1138 497 PANTHER UNCHARACTERIZED 4 496 - -
Alju13g1138 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 366 IPR001680 GO:0005515
Alju13g1138 497 ProSitePatterns Trp-Asp (WD) repeats signature. 344 358 IPR019775 -
Alju13g1138 497 FunFam WD repeat-containing protein 76 189 496 - -
Alju13g1138 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 403 IPR001680 GO:0005515
Alju13g1138 497 Gene3D - 189 497 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1138 197 449 U-box Gene Family AT1G04510 24.074 5.12e-09 56.6