Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1132 ATGGAGAATCAAATGAGTGATTTAGGTGATAACAATGGGACTGCGAAGAAGTTTCCCGTGGGTATGAGTGTTCTGGCGGTTGACAACGACCTAATTTTTCTCAAAGAGTTGGAGACTCTGCTTATCAAATGCGAGTACCAGGTTACTACAACTAATCAGTCTATTAAGGCTTTGGAAATGCTAAGGGAAAACAGGAACAAGTTTGACCTCATAATTAGTGAGGTGAATATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTGGTAGGACTTGAAATGGACCTACCATTCATCATGATGTCAGCACACAGTGATACAAGGCTTGTGATGAAGGCTGTTACAAATGGTGCGTGTGATTATTTACTGAAACCTCTTAGAATGGAAGAGCTTAAGCACATATGGCAACATGTAGTTCGAAGAAAGAAGTTTGATAAAAAGGATCAGAATAAGCCTTCTCAGGTGGAGAAAGAAAACAATATGGCTGGGGAAGGGAATACACGCAAGCCGCGTGTTATTTGGTCACCTGAGCGGCACAGAAACTTTGGGCTTGTTTGA 555 0.4198 MENQMSDLGDNNGTAKKFPVGMSVLAVDNDLIFLKELETLLIKCEYQVTTTNQSIKALEMLRENRNKFDLIISEVNMPDMDGFKLLELVGLEMDLPFIMMSAHSDTRLVMKAVTNGACDYLLKPLRMEELKHIWQHVVRRKKFDKKDQNKPSQVEKENNMAGEGNTRKPRVIWSPERHRNFGLV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1132 184 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Alju13g1132 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 181 IPR045279 GO:0009736
Alju13g1132 184 CDD REC_typeB_ARR-like 24 138 - -
Alju13g1132 184 Gene3D - 22 160 - -
Alju13g1132 184 MobiDBLite consensus disorder prediction 144 171 - -
Alju13g1132 184 SUPERFAMILY CheY-like 21 153 IPR011006 -
Alju13g1132 184 Pfam Response regulator receiver domain 24 132 IPR001789 GO:0000160
Alju13g1132 184 SMART REC_2 22 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1132 Alju-ChrAlju13 30114354 30115862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1132 17 181 Response Regulator Gene Family AT2G25180 54.822 3.69e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju13g1132 Response_reg 8.6e-21 CL0304