Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1115 ATGATTATGCAGCCCAATAGCAGCAAAATGCAACAGCCAATCAACTCTTCTTCCTCTAATTCCTCCCCCATGAACTCTTCCCAAATCCCTCTTCACGACCAGATCCAACAACCTGACCTTCACGACGATTTTCTCGACCAAATGTTCTCTAACCTTCCTTCTTGCTCTTGGCCTGACCTCAATCCTAAGCCCTTCTGGGACCCACAATTCAATCCCTCTGATGACAGCCACAACAATAATAATAATGGCGCCGCTGCTTTCCACTACGACGACAAGTCGTTTCGCAACCACCACCAGATCCCTCCCGCCTCCTCTACTCCACCGCCTCCTTCTAAGTCCTCCGCCGCCGAGGCTGTCGCTTTGATGCTTCAGCGCCAGCTTCTCATGTCCCGAGGCGTTTCCGCCGACTCTGGCCTTCTTCAGATGCCCCTGTCTCTCGGCGCCGCCGGAGGAAACTTCGAGCCTTCCCGTAACGACGTCGTTGACGGTTCCTCCTTCAAATCTCACATTCCCGCCGGCGACGGTACCGTCCAATCTCTGTACAACGGGTTCGCCGGATCTATGCACGACGCGCATCAACCTTCCAACCAAACTCAACATTTCCATCATCCACAGGGGCAGAATTATGGAGCAGCAGGGCCGCCGGCGACGAACCAAGCTCCGGCGCAGCCGAAACAGAGGGTTAGGGCGAGGAGAGGTCAGGCGACGGACCCACACAGCATCGCTGAGAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCTTTGCAGGAACTGGTTCCCAATGCCAACAAGACGGACAAGGCGTCAATGCTGGACGAGATCATAGACTATGTCAAGTTCTTACAGCTCCAAGTGAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCTGCTGCGGTTGCTCCTCTTGTTGCTGATATCTCCTCTGAGGGAGGAGGTGACGGCATTCAAATCGCCGCCGGTCGCAGCTCTAACGGCAACCAAACGTCGTCGTCCTCTAACGACACCCTCACCATGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTTCAGGGGAAAGGTCTCTGCCTCATGCCCATCTCCCTCGCCACGGCCATATCCACCGCCACGTGTCCCTCCCGGAACCCCCTCATCCCTGCCGCCGCCGCCACCGCCAACAACAACCACCACCATCCCGCCGCCACGTCCAACGGCAACGGAGGGGAAGGTCCGTCTTCTCCCAGTATGTCGGTGCTGACCGTGCAGTCGGCCACGGCGGCTAACGACGGAGCCGTTAAAGACGCGGCCTCCGTTTCGAAGCCGTGA 1335 0.573 MIMQPNSSKMQQPINSSSSNSSPMNSSQIPLHDQIQQPDLHDDFLDQMFSNLPSCSWPDLNPKPFWDPQFNPSDDSHNNNNNGAAAFHYDDKSFRNHHQIPPASSTPPPPSKSSAAEAVALMLQRQLLMSRGVSADSGLLQMPLSLGAAGGNFEPSRNDVVDGSSFKSHIPAGDGTVQSLYNGFAGSMHDAHQPSNQTQHFHHPQGQNYGAAGPPATNQAPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDGIQIAAGRSSNGNQTSSSSNDTLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPSRNPLIPAAAATANNNHHHPAATSNGNGGEGPSSPSMSVLTVQSATAANDGAVKDAASVSKP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1115 444 MobiDBLite consensus disorder prediction 397 444 - -
Alju13g1115 444 MobiDBLite consensus disorder prediction 71 86 - -
Alju13g1115 444 FunFam Transcription factor bHLH66 231 296 - -
Alju13g1115 444 MobiDBLite consensus disorder prediction 66 115 - -
Alju13g1115 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
Alju13g1115 444 MobiDBLite consensus disorder prediction 187 239 - -
Alju13g1115 444 MobiDBLite consensus disorder prediction 1 34 - -
Alju13g1115 444 Gene3D - 229 291 IPR036638 GO:0046983
Alju13g1115 444 MobiDBLite consensus disorder prediction 398 430 - -
Alju13g1115 444 MobiDBLite consensus disorder prediction 1 46 - -
Alju13g1115 444 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 376 - -
Alju13g1115 444 SMART finulus 240 289 IPR011598 GO:0046983
Alju13g1115 444 MobiDBLite consensus disorder prediction 189 224 - -
Alju13g1115 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 294 IPR036638 GO:0046983
Alju13g1115 444 Pfam Helix-loop-helix DNA-binding domain 239 284 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1115 Alju-ChrAlju13 29966905 29970240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1115 217 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.344 1.09e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju13g1115 HLH 1.7e-09 No_clan