Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1105 ATGGGTTTTGGGGCATTTGGTTCCCTTTTAGTTCTGACATTTTTGTTTGAGCATTTGGCTTGCCAGCAACCAAATACTGAGGATTTCTTTGTGTCTGAGTTCTTGAAGAACATGAGTTCAGCATCATCTTCCTCACAAGCCTTCAATCTCTCTGCTTCTGTTTGTTCATGGCCAGGTGTTTCCTGTGATGCAAATAAAGAACATGTTGTTGAGTTGATAGCTTCTGGTATGGGACTTTCTGGGCCTATTCCTGACAACACCATTGGCAAGCTCAACAAGCTACAAATTTTGGATCTTAGTAACAACAAAATCACTGCTTTGCCTTCTGATTTCTGGAGCTTAGGCTCTTTGAACGTTCTTAACCTCTCCTCCAATCAGATTTCGGGTTCACTTGCCAGCAACTTTGGCAACTTTGGTCTCCTTGAAGCCTTTGACTTGTCCAGCAACCATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCCCTTGTGAGTTTAAAGATCCTCAAACTTGACAAAAACAAGTTCGAGCACAACATACCTTCTGGGATTCTACAGTGTCAGTCTCTAGTTTCTATTGATCTTTCAATAAATCAGCTTAATGGCACTCTTCCTCAAGGTTTTGGAGCTGCTTTTCCAAAACTTGAAAGCTTGAACCTTGCTGGGAATAATCTTCATGGTCATGATTCAGATTTTTCAGGATTGAAATCCATTACTAGTGTTAACATATCTTCAAATTCCTTTCAGGGTTCTTTTTTGGGTATGTTTCAGGAACAGTTGGAGGTAATTGACCTTAGCAGGAACCAATTTGAGGGTCAGATTTCTCAGGTAAATCTCAACTACAATTTGTCTCATTTGATTTATCTGGATTTATCTGAGAATAGGCTTAGTGGGGAAATTCTCCAGTATCTGAATGCAGCCCAGAATATTAAACACCTTAATCTGGCACACAATAGGTTTGCAAGTCAGAAATTTCCACAAATTGAAAGCCTCTCAAGATTGGAATATCTGAACTTGTCCAAAGCTAATCTGCATGGCCACATTCCTGCTGAAATATCAAAGTTGAGTAATTTGAGTTCACTTGATATTTCTCTGAATAATCTTATTGGGGGAGTTCCATTTCTGAGGAGTGAAAACCTCCAACTTCTTGACCTTTCATACAACAATTTGAGTGGAGAAATCCCTCAAACTGTGTTGGAGAAACTCCCATCAATGGAGAAATATAACTTCTCTTATAATAACTTAACCTTCTGTTCTTTGGGAATCAACCCCAACATCATGCAAACAGCATTCTATGGATCATCAGATAATTGCCCAATTGCTGCGAATCCGAAGCTTTTCAAAAGAACCAATGAACGCAAGGGGATGAAGCTAGCTCTGGCATTGACCCTCTCAATGGTCTGCTTACTTTCTGGCCTTCTATTTCTAGCATTTGGTTGCAGAAGGAAAACAAAATCATGGGCAATGAAGCAGACTTCCTACAAAGAAGAGCAAAACATTTCGGGTCCCTTCTCGTTCCAGACTGATTCAACTACCTGGGTTGCTGATGTCAAGCAAGCAAACTCGGTCCCAGTAGTGATCTTTGAGAAGCCATTACTCAACATTACATTTGCAGATCTCTTGTACTCAACTTCAAATTTTGATAGGGGTACTCTCTTAGCTGAAGGCAAATTCGGGCCTGTTTACCGAGGTTTTCTGCCTAGTGGCATTCAAGTGGCAGTTAAAGTTTTGGTTGTTGGGTCTACATTGACAGATCAAGAAGCTGCTAAAGAGCTCGAGAATATTGGTCGAATCAAGCACCCGAATCTTGTTCCTTTATCTGGATATTGCTTTGCTGGGGATCAAAGGATTGCTATATATGATTACATGGAGAATGGGAACTTGCAAAACTTTCTTCATGACTTGCCACTTGGTTTACAGAGAACAGATGATTGGAGCGCAGACACATGGGAAGAAGGAGATGACATGAATGGAATTCAAAATGCTAGCTCTGAGGGATTATTATCAATCTCATCTTGGCGATTCAGACACAAAATCGCCCTTGGAACCGCTCGAGCATTGGCATTTCTTCACCATGGCTGCTCACCTCCAATCATTCACAGAGATGTTAAAGCTAGCAGTGTCTACTTGGACTATAACTTGGAGCCAAGGTTATCAGATTTTGGGCTGGCCAAGATTTTTGGAAGCAGCTTTGATGAGGAGATTGCTCGAAGCTCACCCGGCTATGTTCCACCCGAGTTTTGTCAACCAGAATGTGACATCCCAACGCCAAAATCTGATGTGTACTGTTATGGGGTTGTGCTCTTTGAACTAATAACAGGAAAAAAGCCAGTTGGGGATGATTATCCTGAAGAAAAAGAAGGGACTTTGGTAAGTTGGGTGAGAGCATTGGTAAGAAAGAACTTAGCTTCAAGAGTTATTGATCCAAAAATTAGTGATAGAGGAATTGATGATCAAATTGAAGAAGCACTTAAGATTGGTTATCTCTGTACTGCTGATCTTCCCTCTAAGCGACCTAGCATGCAGCAGATAGTGGGACTTTTGAAAGATATTGAACCTGCTGCTGGGGAAAAATCATGA 2577 0.4098 MGFGAFGSLLVLTFLFEHLACQQPNTEDFFVSEFLKNMSSASSSSQAFNLSASVCSWPGVSCDANKEHVVELIASGMGLSGPIPDNTIGKLNKLQILDLSNNKITALPSDFWSLGSLNVLNLSSNQISGSLASNFGNFGLLEAFDLSSNHFSGEIPEAISSLVSLKILKLDKNKFEHNIPSGILQCQSLVSIDLSINQLNGTLPQGFGAAFPKLESLNLAGNNLHGHDSDFSGLKSITSVNISSNSFQGSFLGMFQEQLEVIDLSRNQFEGQISQVNLNYNLSHLIYLDLSENRLSGEILQYLNAAQNIKHLNLAHNRFASQKFPQIESLSRLEYLNLSKANLHGHIPAEISKLSNLSSLDISLNNLIGGVPFLRSENLQLLDLSYNNLSGEIPQTVLEKLPSMEKYNFSYNNLTFCSLGINPNIMQTAFYGSSDNCPIAANPKLFKRTNERKGMKLALALTLSMVCLLSGLLFLAFGCRRKTKSWAMKQTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLLYSTSNFDRGTLLAEGKFGPVYRGFLPSGIQVAVKVLVVGSTLTDQEAAKELENIGRIKHPNLVPLSGYCFAGDQRIAIYDYMENGNLQNFLHDLPLGLQRTDDWSADTWEEGDDMNGIQNASSEGLLSISSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSSFDEEIARSSPGYVPPEFCQPECDIPTPKSDVYCYGVVLFELITGKKPVGDDYPEEKEGTLVSWVRALVRKNLASRVIDPKISDRGIDDQIEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPAAGEKS 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1105 858 ProSiteProfiles Protein kinase domain profile. 546 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1105 858 Gene3D Phosphorylase Kinase; domain 1 506 621 - -
Alju13g1105 858 Gene3D Ribonuclease Inhibitor 30 180 IPR032675 -
Alju13g1105 858 Pfam Leucine Rich repeat 283 302 IPR001611 GO:0005515
Alju13g1105 858 FunFam Calmodulin-binding receptor kinase CaMRLK 257 373 - -
Alju13g1105 858 Gene3D Ribonuclease Inhibitor 375 448 IPR032675 -
Alju13g1105 858 Pfam Leucine Rich Repeat 378 396 IPR001611 GO:0005515
Alju13g1105 858 FunFam Putative LRR receptor-like serine/threonine-protein kinase 507 621 - -
Alju13g1105 858 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Alju13g1105 858 SMART LRR_typ_2 162 186 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 211 233 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 114 137 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 330 354 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 282 306 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 91 113 IPR003591 -
Alju13g1105 858 SMART LRR_typ_2 377 400 IPR003591 -
Alju13g1105 858 FunFam Nuclear pore complex protein NUP107 27 181 - -
Alju13g1105 858 Gene3D Ribonuclease Inhibitor 181 278 IPR032675 -
Alju13g1105 858 Gene3D Ribonuclease Inhibitor 279 374 IPR032675 -
Alju13g1105 858 Gene3D Transferase(Phosphotransferase) domain 1 622 857 - -
Alju13g1105 858 SMART serkin_6 546 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1105 858 PRINTS Leucine-rich repeat signature 282 295 - -
Alju13g1105 858 PRINTS Leucine-rich repeat signature 94 107 - -
Alju13g1105 858 SUPERFAMILY Protein kinase-like (PK-like) 522 847 IPR011009 -
Alju13g1105 858 SUPERFAMILY L domain-like 44 419 - -
Alju13g1105 858 Pfam Leucine rich repeat 83 127 IPR001611 GO:0005515
Alju13g1105 858 Pfam Protein tyrosine and serine/threonine kinase 550 845 IPR001245 GO:0004672|GO:0006468
Alju13g1105 858 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 258 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1105 Alju-ChrAlju13 29861993 29864569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1105 41 850 Receptor kinase-like Gene Family AT5G07280 31.750 4.34e-111 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Alju13g1105 PK_Tyr_Ser-Thr 6.8e-32 CL0016