Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1103 ATGCCGCTTCACAGTCACACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCGCCGTCACGCCCTCCGGCCTCCTCCGATTCGAACCCTTGATCGTCCTGTTGAACCGGAAGATAAACGACAAGGTCGTGATAAAAGTGAAGGACAACATGATGACGATGATGATGATGATGACGACGACGATGAGAAGAAGCCCCCGAAACGAGTCTGTAAAGAACCTTCTAGCGAGTTACGGAATTGTAAATCTTCAGATGAGGAGGCAGAGCCGCGAGAATCTACTTCAGAAACCCTAGTTATGTCCTCTTCGGTTGAATCGGCGATGGCTAGTAAGGGTGCTGATTTACAGGCCAGCTCTGCTACGCGGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGAACCTTCAAACATGGAAATTAGTGTAAGGGAAACAGTCCAGGAAGCTAAGAATCTGACAGAAGATCGACTTGCGCTTTCTATATGCCCAACTCCATTGTCTGCAGTATCACCATCTTCTGCTACACAACCTTTATCATCTATTCATAGTTCAACTCTATCAGAACAGAGACCATCTCCTCAGAACATTAGTAATGGACACGTGCTGGGAGCAGGCAAGAAAAATTCTTTTGGTGGTAAGGCTTTTTCTGCTGTCAATGTTGCAAGGGCGTCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTAGTGCAAAGAAGATTGAATTTTGCGATCATTCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCATGAGCCACTACGGAAGACTGACACTAACACCACTGGGGAAATTAAGTTCCTGCCATCTAATGAACCTACTGCTGACGCCAATCTTCCAGAACAGCCCATTGGAGTGCCCAAGGATGCAGATCCAACCTCTTCTTCAAAAGAACCTCTACAAGATTTACCTTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAAGAAGAGTGAAGAATGGTGACTTAACAAACTTGGACTCGCATGTGGAACCGGGAAAGAATTCTAAGTATGTTTTGCATGCAGCAGGGGATGTTGGAATATCAGGAGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTCGATGATCCTAGTGCTGTCATCATTACATATAAAGGAGCACACAACCATGACAAGCCTGTGCCCAAGAAACGACACAGCCCACCAAGTGCTCCTCCTGTGGCTGCTACTGCCCCTGCCTTGTCAAACAATTTGCAACTCACGATTACTGATTCACAGCGAAACGAAGAAAATTCTGCTCAGTGGTCGGTGGACTCTGAAGAAGAATTAACTGAAGACGCCTCTGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACTCTCTTAAGCATGGGTGAAATTAAACCTTGCTGA 1647 0.4614 MPLHSHTSDPIKRLSSLFRTIPYAAMPERRHALRPPPIRTLDRPVEPEDKRQGRDKSEGQHDDDDDDDDDDDEKKPPKRVCKEPSSELRNCKSSDEEAEPRESTSETLVMSSSVESAMASKGADLQASSATRIDGRDESKEPNEPSNMEISVRETVQEAKNLTEDRLALSICPTPLSAVSPSSATQPLSSIHSSTLSEQRPSPQNISNGHVLGAGKKNSFGGKAFSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCSAKKIEFCDHSGHMIEIIYKGQHSHEPLRKTDTNTTGEIKFLPSNEPTADANLPEQPIGVPKDADPTSSSKEPLQDLPCSADKKRQNSSGLSENGKFILKVEHVDEPELKRRVKNGDLTNLDSHVEPGKNSKYVLHAAGDVGISGDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPSAVIITYKGAHNHDKPVPKKRHSPPSAPPVAATAPALSNNLQLTITDSQRNEENSAQWSVDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1103 548 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 184 503 IPR044810 GO:0003700
Alju13g1103 548 MobiDBLite consensus disorder prediction 104 127 - -
Alju13g1103 548 MobiDBLite consensus disorder prediction 487 510 - -
Alju13g1103 548 FunFam WRKY transcription factor 397 471 - -
Alju13g1103 548 ProSiteProfiles WRKY domain profile. 405 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 MobiDBLite consensus disorder prediction 334 357 - -
Alju13g1103 548 MobiDBLite consensus disorder prediction 465 532 - -
Alju13g1103 548 MobiDBLite consensus disorder prediction 32 60 - -
Alju13g1103 548 Pfam WRKY DNA -binding domain 412 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 Pfam WRKY DNA -binding domain 237 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 SMART WRKY_cls 410 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 SMART WRKY_cls 235 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 SUPERFAMILY WRKY DNA-binding domain 233 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 MobiDBLite consensus disorder prediction 292 357 - -
Alju13g1103 548 MobiDBLite consensus disorder prediction 180 203 - -
Alju13g1103 548 SUPERFAMILY WRKY DNA-binding domain 406 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 MobiDBLite consensus disorder prediction 24 151 - -
Alju13g1103 548 ProSiteProfiles WRKY domain profile. 230 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 MobiDBLite consensus disorder prediction 72 103 - -
Alju13g1103 548 Gene3D WRKY domain 223 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1103 548 Gene3D WRKY domain 395 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1103 Alju-ChrAlju13 29828017 29832488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1103 115 548 WRKY Transcription Factor Family AT4G30935 46.681 8.40e-111 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju13g1103 WRKY 2.4e-24 CL0274