Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1097 ATGTGCCACTGTGCTTGGTTGCTGGCAGCAATCGAATATTTGTCTTCAAGGTTGTATATATCCTGTATTTGTGATCAACTTTCAAAGATGTTTGACTGTAATTACAAGTCACAATACATGCGTAGCCAGCGGGAAAAATTTGCGAGGTTGGATCACTTGGACTCTAGACTATCTCCATCTTCTGATGCTGGAAATAATAAATGTGGATTTGGTACATTTAAATCAAGCCATGGTGGTTATGCACGCATTGGAAACACTGGATCATTTAAAAGAGGAATGAGAAAGGGGTCTGAAGGGCTGAAGTCCATTGGCCGATCACTTGGATTTGGGGTATCTCGGGCAGTCTTCCCAGAAGACCTTAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAGATTTTTACTCTTGTGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCAGTCTCTATTGATCCATTATTTTTTTATCTCCCTGTGATCAATGATTCAGCAAACTGTCTTGGTATAGATAGAAACATGGCAATCATAGTCAGCACTCTGAGAGCAGTCATTGATGCCTTCTACCTTATACGCATGGCTCTCCAATTTCGTACTGCTTACATAGCTCCATCATCTCGTGTCTTTGGACGAGGTGAACTTGTTATAGATCCATCACAAATTGCCAAGCGATACTTACAGCGATATTTCATTATCGATTTCCTTTCAGTGTTGCCCTTGCCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTATTGGCAACAAAGGAGGCCTTACTATTCATTATCTTGCTTCAATATGTTCCTCGATTGCTCCGGATGGTACCGTTGACTTCAGAACTTAAGAGAACATCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCATATTATTTGCTATTATACATGCTCGCTAGTCATATAGTTGGAGCGTTTTGGTACTTGTTAGCCATTGAACGCAACGACTCATGCTGGCAGAAGGCTTGCAGTGAAAATGGATGTAACAAAAATTTCTTGTACTGTGGCAACCAGCACATGGAAGGTTATAGTGCCTGGCAGAATAGAAGCAGAGATATTTTCAATTCACAGTGCTCTGTTGATGGTGAAAATCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCTGGGATTGTTTCATCGAAAACGTTCATCTCGAAATACTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGCACACTCGGCCAAGGGCTTCAAACCAGCACCTACACTGGGGAGGTTATATTTTCAATAGCGCTGGCCATTTTCGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGACGTACCTTCAGTCTCTTACCATCAGGCTTGAGGAAATGAGAGTCAAAAGACGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCACGAGCTTAGGGAACGTGTTAGACGCTATGATCAATATAAGTGGCTGGCAACACGTGGCGTGGACGAAGAAAGTTTGGTGCAGAGTCTACCAAAGGATCTTAGAAGAGATATTAAGCGTCATCTTTGTCTGGCTTTAGTGAGAAGGGTGCCACTATTTGAGAGTATGGATGAGAGATTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTATTTACAGAGAATACTTACATTGTTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTTGAGAGTGTTACCACGGATGGCGGGAGAAGCGGATTTTTCAACCGAACTTTCCTAAAAGAGACAGACTTCTGCGGCGAGGAGCTTTTAACATGGGCCTTGGATCCCAAGTCTGGTTCCAACTTTCCATCTTCTACTAGAACAGTTAAAACACTTGCAGAGGTTGAGGCTTTTGCGTTGATTTCTGAAGAGTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGTAGGCAGGTTCAACATACCTTTCGTTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGAGGAAGATTATGGAGCTTCGTCGGAAAGAAGAATGTGAAGAATCAGAAGGAGCTCGCAACAATGCCAGTGGTGCTAGTTCATACAGCATTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGTGGTATTCATCGTAATAGGAATGCCAAGACTGCCAGAGAATTGGTGAAACTACAGAAGCCACCAGAGCCTGACTTTACTGCTGATCAATGA 2283 0.4293 MCHCAWLLAAIEYLSSRLYISCICDQLSKMFDCNYKSQYMRSQREKFARLDHLDSRLSPSSDAGNNKCGFGTFKSSHGGYARIGNTGSFKRGMRKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDRFLLLWNKLFVISCILAVSIDPLFFYLPVINDSANCLGIDRNMAIIVSTLRAVIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKEALLFIILLQYVPRLLRMVPLTSELKRTSGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSENGCNKNFLYCGNQHMEGYSAWQNRSRDIFNSQCSVDGENPPFDYGIFTQAFSSGIVSSKTFISKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNFPSSTRTVKTLAEVEAFALISEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEECEESEGARNNASGASSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADQ 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1097 760 MobiDBLite consensus disorder prediction 741 760 - -
Alju13g1097 760 ProSiteProfiles cAMP/cGMP binding motif profile. 534 618 IPR000595 -
Alju13g1097 760 Gene3D Jelly Rolls 532 652 IPR014710 -
Alju13g1097 760 SMART cnmp_10 534 665 IPR000595 -
Alju13g1097 760 FunFam Cyclic nucleotide-gated ion channel 1 532 650 - -
Alju13g1097 760 SUPERFAMILY cAMP-binding domain-like 463 649 IPR018490 -
Alju13g1097 760 SUPERFAMILY Voltage-gated potassium channels 129 456 - -
Alju13g1097 760 CDD CAP_ED 534 665 IPR000595 -
Alju13g1097 760 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 119 756 - -
Alju13g1097 760 Gene3D Helix hairpin bin 462 525 - -
Alju13g1097 760 Pfam Ion transport protein 137 460 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju13g1097 760 FunFam Cyclic nucleotide-gated ion channel 1 461 525 - -
Alju13g1097 760 Gene3D - 140 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1097 Alju-ChrAlju13 29777064 29782303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1097 30 759 Ion Channels AT2G23980 75.167 0.0 1147