Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1092 ATGTTATACGCACATCCTTACTCACCTCACCAATGTGAAGCAGAGAGAGAGAGTGATATATTATATATATATATAATGGGAGTTGGAAGCAATAAAGATATCTTGTTTCTGTGGTTACTACTGATAGTGGCTTCTTGTTGTTCATCATGGTCTGTAGAGGAACATCGAATAAAGCAGTTGCCGGGGCAGCCACCAGTGGGCTTCACTCAGTTCTCCGGCTACGTGACGGTGAACCGCCGGCATGGGAGAGCTTTGTTCTACTGGCTCACTCAGGCCACCTCTTCCCCTCACAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCATCTGTAGCATATGGGGCATCAGAAGAAATTGGTCCATTTCTGATAAACAAAACTGGTTCTTCTCTATATCTTAACAAGTATGCATGGAACAGAGAAGCAAATACCCTTTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACTACTGGGGACAAAAGGACAGCTCAAGATGCACTGATTTTTCTAATTAGATGGATGTCAATGTTTCCACACTATAAATACAGAGAGTTTTACATTGCTGGAGAGAGCTATGCAGGTCATTACATTCCCCAATTGGCTAAGCAAATCTATGATTATAATAAAGCACACCCACATATCATTAATCTAAAAGGGTTCATTGTGGGAAATGCTTTAACTGATGACTACTATGATGGGATTGGAACTATCACATACTGGTGGAGCCATGCTCTGATATCTGATCTCTCCTATCATTCAATCCTCAAATACTGCAACTTCACATCAGAAAAGACTTCCAAAAAATGTGATGATGCAGTGAGCTATGCCGTTAACCATGAATTTGGAAACATCGATGCATACAGTATTTATACGCCGCCATGCCCAACTTGGCATAACGATACCTTAAGGTATATACGGTTCAAGAATACAGTGTTACATAGGATTTCAGGGTATGATCCATGTACAGAACAACGTGCAGAAAAATATTATAACCGACCCGAAGTGCAGCAAGCAATGCATGCAAATGTTACAGGCATACCTTATAAGTGGACTGCTTGCAGTAATGTGCTCCTGAGAAACTGGAAGGATTCTCCAGTTTCTGTATTGCCAATATACAAAGAGTTGATTGCGGCTGGTTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTAACAGCCACTAGGTTTTCCCTTAACCATCTTAACCTCACCATTAAAGCTCGTTGGTATCCATGGTACTCAGGTGGACAGGTAGGCGGATGGACAGAGGTGTATGAAGGGCTCACATTTGCCACAGTGAGAGGAGCTGGGCATGAAGTACCATTATTTCAGCCTAGGCGAGCGTTCACACTCTTCAAATCTTTCTTAGCAGGAAAGGAGCTACCAAAATCTTAG 1446 0.426 MLYAHPYSPHQCEAERESDILYIYIMGVGSNKDILFLWLLLIVASCCSSWSVEEHRIKQLPGQPPVGFTQFSGYVTVNRRHGRALFYWLTQATSSPHNKPLVLWLNGGPGCSSVAYGASEEIGPFLINKTGSSLYLNKYAWNREANTLFLESPAGVGFSYTNTSSDLKTTGDKRTAQDALIFLIRWMSMFPHYKYREFYIAGESYAGHYIPQLAKQIYDYNKAHPHIINLKGFIVGNALTDDYYDGIGTITYWWSHALISDLSYHSILKYCNFTSEKTSKKCDDAVSYAVNHEFGNIDAYSIYTPPCPTWHNDTLRYIRFKNTVLHRISGYDPCTEQRAEKYYNRPEVQQAMHANVTGIPYKWTACSNVLLRNWKDSPVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKARWYPWYSGGQVGGWTEVYEGLTFATVRGAGHEVPLFQPRRAFTLFKSFLAGKELPKS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1092 481 FunFam Carboxypeptidase 381 475 - -
Alju13g1092 481 Gene3D - 381 475 - -
Alju13g1092 481 Gene3D - 334 371 - -
Alju13g1092 481 Pfam Serine carboxypeptidase 62 474 IPR001563 GO:0004185|GO:0006508
Alju13g1092 481 Gene3D alpha/beta hydrolase 51 309 IPR029058 -
Alju13g1092 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 445 462 IPR033124 GO:0004185
Alju13g1092 481 SUPERFAMILY alpha/beta-Hydrolases 55 478 IPR029058 -
Alju13g1092 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 55 462 IPR001563 GO:0004185|GO:0006508
Alju13g1092 481 FunFam Carboxypeptidase 51 309 - -
Alju13g1092 481 FunFam Carboxypeptidase 330 478 - -
Alju13g1092 481 ProSitePatterns Serine carboxypeptidases, serine active site. 200 207 IPR018202 GO:0004185
Alju13g1092 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Alju13g1092 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Alju13g1092 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Alju13g1092 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1092 Alju-ChrAlju13 29744142 29756131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1092 339 478 Calmodulin-binding Proteins AT2G22960 29.787 7.59e-15 71.2