Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1082 ATGCAGCAAAGTGATCAGAAGGTGATAAACTTGAGGCCTGGTGGTGGTCGTCCCGGCGGTAGCAGGTTCCTTGCTCCTCGATTCGATTCATCCTCATCGGCTTCCTCTGCTTCTCCTGCTTTTGGTTCCTTTTCCTCTGATCCTTCTCTCCTTCGTCCCCATGGCGGTGCTCCAACTTCTTTTTCCATTAAGGCTGGAGATGCATGGTTTGAGGGTCGTGAGCGTGTGCGATACACTGGGGATCAGCTTTTACAACTGAGGGAGGTTGTTGAGATCCCTGAAGATATTTTAAAAATTAAACAAGATATAGAAACTGAACTTTTTGGTGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGGTACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTTCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATCGCTTTGACTCAAGGAACCAGGATTCTAATCAGTTTAATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACATATTTCTTCTAACCAAGGAGGACCTGCTCCAACTTTAATCAAGGCTGAAGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACTGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGGTGTCATTTCACTTATATTTGATAAGGCTGTACTGGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCCTCTGATGAACCTGGTGGGAAATTAATCACTTTTAAGCGAACACTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGATGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAATATCCAACTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGATCTGATAGCAAGACCTGTCCAGTCGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTGATGAAAACCAAAAATCAAGGCGTATTAATGACATGTACTTTAGCCGATTGAAAGATCTGAGCACAAACCCTCAACTTGTATCACGGTTGAGGTTCATGGTTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAGGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCTACTGCAAGCATTAGAAATAACCGCGCTGCAGCTTCTGGTGTTCAAGGAAATATAAGCCCCGGTGGATTTCCGATTTCTCGACCTGGTACAGGAGGTATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGAAATCGATAGTGACAACTGGGAAATGCCTAGGGCAAGATCAATGCCAAGAGGAGACATGTTGGGTATGCAAGCTGGAGGACGTGGCCAGTCTCCTTTACTCTCGAAGTCATCAGCCCTGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTCTCATAAGTGGAAGAAGCAGCGCCCTAGTGCATGGTGGTAGTGCTCCTCCTTCTCGTCCATCAAACTTTGTTTCTGGTGCCGAGCCTGCATCTCAAATCCCTACTTCTGTGAAAGCTGTTCCTAGTGGGTCCTTTGAGAAGCCACAGACTCCACCTCTAAAATTAAATTTTGACGAACTTCGCGGCAAAACCATCTCTCTTCTGGAAGAATATTTCAGTGTTCGCCTTTTAGATGAGGCATTGCAGTGTGTGGTAGAACTAAAAGCTCCATCCTACCACCCTGAGCTTGTTAAGGAGGCCATTTCCCTTGCCCTAGATAAAAGTCCACCCTGTGTTGATATTGTTGCCAATCTTCTTGAGTATCTATTTATTAAGAAGATTCTTACTGCTGGGGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTGGACGATATCGGCATAGATTTGCCTAAAGCCCCAAATAATTTTGGTGAGATAATTGGGAAGCTAATTTTGGCTGGGGGATTGGATTTTAAGGTGGTTTTAGAGATCCTTAAGAAGGTGGAAGATGACTTTTTCCAGAAAGCAATATTTGAAGCTGCAAAAAGGATCATTAGTGCTTCATCTGGGCAAGCCCTTTTAGATTCCCAAGCCTCCGATATTGAGGCTTGCCACAGTTTGCTCAAGTGA 2400 0.445 MQQSDQKVINLRPGGGRPGGSRFLAPRFDSSSSASSASPAFGSFSSDPSLLRPHGGAPTSFSIKAGDAWFEGRERVRYTGDQLLQLREVVEIPEDILKIKQDIETELFGEDQSWGRAENSAQQFQNRYSEPDNRDWRGRSGQLPASSEEKSWENLRENREFGNRFDSRNQDSNQFNRQDQLNSQFARAHISSNQGGPAPTLIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKLITFKRTLLNNCQEAFEGDDKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIQLIGELLKQKMVPEKIVHHIVQELLGSDSKTCPVEENVEAICQFFNTIGKQLDENQKSRRINDMYFSRLKDLSTNPQLVSRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAAASGVQGNISPGGFPISRPGTGGMMPGMPGTRKMPGMPEIDSDNWEMPRARSMPRGDMLGMQAGGRGQSPLLSKSSALNSKLLPQGSGGLISGRSSALVHGGSAPPSRPSNFVSGAEPASQIPTSVKAVPSGSFEKPQTPPLKLNFDELRGKTISLLEEYFSVRLLDEALQCVVELKAPSYHPELVKEAISLALDKSPPCVDIVANLLEYLFIKKILTAGDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVLEILKKVEDDFFQKAIFEAAKRIISASSGQALLDSQASDIEACHSLLK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1082 799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 68 795 IPR045208 GO:0003743
Alju13g1082 799 Pfam MA3 domain 636 747 IPR003891 -
Alju13g1082 799 Pfam MIF4G domain 222 447 IPR003890 GO:0003723|GO:0005515
Alju13g1082 799 MobiDBLite consensus disorder prediction 26 45 - -
Alju13g1082 799 MobiDBLite consensus disorder prediction 114 153 - -
Alju13g1082 799 ProSiteProfiles MI domain profile. 634 756 IPR003891 -
Alju13g1082 799 SUPERFAMILY ARM repeat 630 786 IPR016024 -
Alju13g1082 799 SMART ma3_7 635 747 IPR003891 -
Alju13g1082 799 MobiDBLite consensus disorder prediction 581 604 - -
Alju13g1082 799 MobiDBLite consensus disorder prediction 1 58 - -
Alju13g1082 799 Gene3D - 629 793 - -
Alju13g1082 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 213 448 - -
Alju13g1082 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 628 789 - -
Alju13g1082 799 SUPERFAMILY ARM repeat 215 450 IPR016024 -
Alju13g1082 799 MobiDBLite consensus disorder prediction 115 129 - -
Alju13g1082 799 SMART if4_15 222 447 IPR003890 GO:0003723|GO:0005515
Alju13g1082 799 Gene3D - 213 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1082 Alju-ChrAlju13 29692103 29697184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1082 1 797 Eukaryotic Initiation Factors Gene Family AT5G57870 64.214 0.0 966