Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1069 ATGTTTCTAATTTTCTGTCTTGTCGTTTTTCGCTTTGGTGGGGTTTATGGTGGCGAAGAAAACGCCCACAAGGTGAATGATGAAAGTTCACTGAGAAGTTTCATGTCAGGAATTGTTTCAGACCCAGAAAACTCTCTAGTTAGTTGGAGTTCTTCTGGTGTTCCATTTTGTAATTGGTCGGGAATTGTATGTAACAATGTGAGTGGGAAGGTTACAGAGATTCATCTTGGAAGGAGGTCACTAGGGGGTACAATTTCCCCTGCTATTGGTAAACTCTCTGATTTGAAAATTCTTGATCTTTCTGAAAACTTTTTTGTGGGTCATATCCCAAAAGAGTTGGGGAGTTTAGTTCAGCTTGAAAAACTCAGTTTGTATTGGAATCTTCTAGAAGGGAAGATCCCCTCAGAGCTGGGTTCACTTCGAAACTTACACCACCTAGACATAGGAAGTAATAGGCTCGAGGGTGTGATTCCACCGTCATTGTTCTGCAATTTGTCATCCTCATTGAAAAATTTAGACCTCTCTAACAATTCCTTAGTTGGACAAATCCCCTTGAATAATGAGTGTGTGCTTCATGAGCTTAAGCATCTCTTAGTTTGGTCTAACCATTTTGCTGGACAAGTTCCTCTTGCTCTTTCAAACTCCACAAAACTAGAATGGCTCGATTTGGGGTCAAACAGGTTTAGTGGTGAGCTACCATCAGAGATTGTAGGTAATTGGCCATACATACAATATCTCTACTTATCCTCCAATGGCTTTGTTGCCCATGATGGTAATACCAATCTTGAACCATTCTTTGCTTCCTTAGTGAATTTGTCTAACCTTCAAAATCTTGAATTAGATGGAAACTATCTTGGAGGGAAGCTGCCTCATATAATTGGAGATCTTCCAACATCATTAATACAGCTTCATCTTGAGGATAATCTCATACATGGTTCCATTCCCTCAGACATCGCCAAACTTTTCAATCTAACTCTATTAAATTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCAAACCTATCCCTGATGAGTAAGCTTGAGAGAATCTTTTTGTCCAATAATTCATTATCTGGTGAGATTCCTTCAACCCTTGGTCAAATTCCACATCTGGGTCTGCTGGATTTGACAAGAAACAAGCTTTCTGGTTCAATACCAGATAATTTTGCCAATCTTTCCCAGTTAAGAAGGCTTTTACTTTATGATAACCAGCTTTCTGGAACAATACCACCAAGCCTTGGAAAATGTGTCAATTTGGATATTTTAGACCTATCTCACAACAAGATTTCAGGGGTGATTCCTTCAGAAGTTGCGGCCTTAAGTAACTTGAAATTATACTTGAATTTGTCAAACAATAAATTAGATGGGCTTCTGCCATTAGAGCTCAGCAAAATGGACATGGTTCTAGCCATCGATCTATCTATGAACAACCTCTCCGGTAGAGTCCCACCACAGTTTGAAAGTTGCATAGCACTTGAGTACCTTAACCTTTCGGGTAATTCTTTAGAAGGCCCTCTTCCATCTTCTTTAGGCCAACTGCTTTACATTCGAACACTGGACGTGTCTCTGAATCGATTGACTGGGGAAATACCTCAATCCCTGCAGTTATCTTCTTCTCTCAAAGAACTCAATTTCTCTTTCAATAAATTCTCTGGGAGCGTATCAATTGAGGGAGCTTTTTCATCTCTCACCGCAGACTCTTTCCTAGGAAATGATGGCATTTGTGGCTCCGTAAAAGGATTGCCTGGCTGCCATAAGAAACATAGCCATCATTTGATTCTCTTATTAATTTTGGTGTTACTCTTTGGCACCCCCATGTTCTGCATGTTTAGGCTCAATACTGGAGTCCGAAAGAGACTAGCCATTGCTAGCATGGGAAACTTGGAGCGTGAAGAGGAAAGAAAAGAACTCAATTACCCAAGAATTTCACATAAACAACTTATTGAAGCCACTGGGGGCTTCAATGCTTCAAACTTGATTGGTTCAGGTCGGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCAGTGAAAGTACTAAACTCTTCAACTGCTGATGATATTTCAGGGAGCTTTAAAAGGGAATGTCAGATCCTAAAGAAGACTAGGCACAGAAACTTGATAAGGATCATCAAAGTTTGCAGCAAGCCAGAGTTCAAGGCTCTTGTTCTTCCACTAATGCCAAACGGTAGCCTCGAGAGGCGTCTATATCCAAGCAGTGGTTTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTGAGGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTCCACCATTACTCTCCAGTTAAAGTGGTTCATTGTGATCTTAAGCCAAGTAATATACTTCTTGATGATGATATGACTGCTCTGGTGACAGATTTTGGAATTTCAAGGCTTGTTAAATGTGATGAAAGCAACCCCTCCAATAACTCAACATCTTTCAGTTCAACACAAGGCTTGCTAGTGGGCTCTATTGGCTACATAGCTCCTGAGTATGGAATGGGGAAAAATGCCTCAACTAAAGGTGATGTCTACAGTTTTGGAGTAATTCTGCTAGAAATTGTGACAGGAAGGCCTCCTACAGATGTCCTTATCCATGAAGGTTCAAGCTTGCATGAATGGGTTAAGAGACAGTATCCACACAAGCTTGAAGCCATTGTGAAACAAGCATTGGAAAGGTATTTCCTTTTAAGCCTCCCTCCAGTGCAACATAACAGAATCTGGCAAGATGTTATCATGGAACTCATAGAGCTGGGCCTTGTTTGCACACAGAACAATCCTTCAATGAGACCAAGCATGTTGGATGTAGCTCAAGAACTTGGGAGGTTGAAAGACTACTTGTCTAATCCATCACTTCATATGATTGAAGAAGTCAATTGCAAGGATGATATCCTTTCAACTGTGAATATTACTTAA 2937 0.4069 MFLIFCLVVFRFGGVYGGEENAHKVNDESSLRSFMSGIVSDPENSLVSWSSSGVPFCNWSGIVCNNVSGKVTEIHLGRRSLGGTISPAIGKLSDLKILDLSENFFVGHIPKELGSLVQLEKLSLYWNLLEGKIPSELGSLRNLHHLDIGSNRLEGVIPPSLFCNLSSSLKNLDLSNNSLVGQIPLNNECVLHELKHLLVWSNHFAGQVPLALSNSTKLEWLDLGSNRFSGELPSEIVGNWPYIQYLYLSSNGFVAHDGNTNLEPFFASLVNLSNLQNLELDGNYLGGKLPHIIGDLPTSLIQLHLEDNLIHGSIPSDIAKLFNLTLLNLSSNQLNGSIPPNLSLMSKLERIFLSNNSLSGEIPSTLGQIPHLGLLDLTRNKLSGSIPDNFANLSQLRRLLLYDNQLSGTIPPSLGKCVNLDILDLSHNKISGVIPSEVAALSNLKLYLNLSNNKLDGLLPLELSKMDMVLAIDLSMNNLSGRVPPQFESCIALEYLNLSGNSLEGPLPSSLGQLLYIRTLDVSLNRLTGEIPQSLQLSSSLKELNFSFNKFSGSVSIEGAFSSLTADSFLGNDGICGSVKGLPGCHKKHSHHLILLLILVLLFGTPMFCMFRLNTGVRKRLAIASMGNLEREEERKELNYPRISHKQLIEATGGFNASNLIGSGRFGKVYKGVLQDNTRIAVKVLNSSTADDISGSFKRECQILKKTRHRNLIRIIKVCSKPEFKALVLPLMPNGSLERRLYPSSGLSQRLDLVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDDDMTALVTDFGISRLVKCDESNPSNNSTSFSSTQGLLVGSIGYIAPEYGMGKNASTKGDVYSFGVILLEIVTGRPPTDVLIHEGSSLHEWVKRQYPHKLEAIVKQALERYFLLSLPPVQHNRIWQDVIMELIELGLVCTQNNPSMRPSMLDVAQELGRLKDYLSNPSLHMIEEVNCKDDILSTVNIT 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1069 978 CDD STKc_IRAK 661 950 - -
Alju13g1069 978 Gene3D Phosphorylase Kinase; domain 1 627 730 - -
Alju13g1069 978 Gene3D Ribonuclease Inhibitor 26 188 IPR032675 -
Alju13g1069 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 959 - -
Alju13g1069 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Alju13g1069 978 Gene3D Ribonuclease Inhibitor 189 259 IPR032675 -
Alju13g1069 978 FunFam Leucine-rich repeat receptor-like protein kinase TDR 269 587 - -
Alju13g1069 978 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 60 259 - -
Alju13g1069 978 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Alju13g1069 978 Pfam Leucine Rich Repeat 493 513 IPR001611 GO:0005515
Alju13g1069 978 SMART serkin_6 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1069 978 Gene3D Ribonuclease Inhibitor 260 593 IPR032675 -
Alju13g1069 978 SUPERFAMILY Protein kinase-like (PK-like) 638 947 IPR011009 -
Alju13g1069 978 SUPERFAMILY L domain-like 323 577 - -
Alju13g1069 978 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Alju13g1069 978 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 345 947 - -
Alju13g1069 978 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Alju13g1069 978 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Alju13g1069 978 SUPERFAMILY L domain-like 31 254 - -
Alju13g1069 978 SMART LRR_typ_2 92 116 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 321 345 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 140 164 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 369 392 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 216 239 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 441 465 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 393 417 IPR003591 -
Alju13g1069 978 SMART LRR_typ_2 272 296 IPR003591 -
Alju13g1069 978 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Alju13g1069 978 ProSiteProfiles Leucine-rich repeat profile. 323 345 IPR001611 GO:0005515
Alju13g1069 978 Pfam Protein kinase domain 657 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1069 978 ProSiteProfiles Protein kinase domain profile. 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1069 978 Gene3D Transferase(Phosphotransferase) domain 1 732 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1069 Alju-ChrAlju13 29562120 29565809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1069 27 952 Receptor kinase-like Gene Family AT3G47570 34.533 2.14e-155 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju13g1069 Pkinase 1e-44 CL0016