Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1066 ATGATGGCCATATATTCAGGAGAAGAATCGACCTTAATCCCAGATTCAATCGATAGCCCCTTTTCTTTGGAATACATGGCAAAACCTAACAAGTCGGTATTTGCTTTTTTGGCTCAGATTTTAGCTATAGTAGCCACCATTTCGGCGAATACTGGGTTTGCTTTGGGCACAGCTTCTTTCTCGGACCCGTTTGTCCAGCAACGACTGGACAGGATTGATAAGCTACCGGGTCAAACGTTTAACATCGAATTCGCACATTACGCTGGGTATGTCACTGTCAACCAGGAATCTGGGAGGGCACTGTTTTACTGGTTCTTTGAAGCTGCTTCGGACCCTGAAACGAGGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGATGTTCATCTATTGCTTATGGAGAAGCAGAGGAAATTGGTCCCTTTCACATTCATGCTGATGGCAAGACCCTTTATCTAAATCCTCACTCTTGGAATCAAGTTGCCAACATTCTTTTTGTTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAACACTTCATCTGACATACTGAACAATGGCGATAAGAGGACTGCTGAGGACTCTTTGGAATTCCTGCTGAAGTGGTTTGAGCGGTTTCCCCAATATAAAGGAAGAGATTTCTTTATCTCTGGTGAAAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTGAACTACAACAAGAACGCCAAAGAAAAAGCTATCAATCTGAAAGGCTACATGGTAGGAAATGCTCTAACTGATGATTACAATGATCACAAGGGCGTTGCCCAGTTTTTGTGGTCATCTGGTTTGATTTCTGATCAAACATATCAGCAAATGGACCTTCTATGTGATAATGAGCCTTTCCTGAATCCTTCAGATTCATGTGTAAAAATTTTAGAGAACGCTGACAAAGAAGTTGGCCAAATTGATATGTACAGTATCTTCACTCCTCCATGCACTGCTAATGTTAGCCAGACAAACAAGCTGCTGAAAAGAAGGCATAAAATTGGAAGACTTAGAGCAGTATATGATCCTTGCACTGAGAAGCACTCCACCATATACTTCAATCTACCTGAGGTCCAGGAGGCTCTTCATGTTGATGCAGCTCACAAGCCTGCTAAATGGGAGACCTGCAGTGACGAGGTAAATGCAAACTGGAAGGATTCTCCATTCACAGTGCTTGATATTTATCGTGAACTTATTCCTACAGGACTGAGGATATGGGTTTTCAGTGGTGACACAGATGGTGTGATCCCAGTGACATCCACTCGCTACAGCATAGATGCTCTGAAACTTAAAACCATGAGCCCTTGGCGTCCTTGGTATGATGATGGGCAGGTGGGAGGATGGACACAAGAATATGAAGGACTGACTTTTGTAGCAGTAAGGGGGGCAGGGCATGAGGTTCCTCTTCACAGACCAAAATATGCTCTTGCTCTCATCAAAGCCTTCCTTGCTGGAACCTTCATGCCTTCCCTTGATCCTGAGCTTGTCAGTGCCTATTGA 1521 0.4379 MMAIYSGEESTLIPDSIDSPFSLEYMAKPNKSVFAFLAQILAIVATISANTGFALGTASFSDPFVQQRLDRIDKLPGQTFNIEFAHYAGYVTVNQESGRALFYWFFEAASDPETRPLVLWLNGGPGCSSIAYGEAEEIGPFHIHADGKTLYLNPHSWNQVANILFVDSPVGVGFSYSNTSSDILNNGDKRTAEDSLEFLLKWFERFPQYKGRDFFISGESYAGHYVPQLSQVIVNYNKNAKEKAINLKGYMVGNALTDDYNDHKGVAQFLWSSGLISDQTYQQMDLLCDNEPFLNPSDSCVKILENADKEVGQIDMYSIFTPPCTANVSQTNKLLKRRHKIGRLRAVYDPCTEKHSTIYFNLPEVQEALHVDAAHKPAKWETCSDEVNANWKDSPFTVLDIYRELIPTGLRIWVFSGDTDGVIPVTSTRYSIDALKLKTMSPWRPWYDDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKYALALIKAFLAGTFMPSLDPELVSAY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1066 506 FunFam Carboxypeptidase 66 326 - -
Alju13g1066 506 SUPERFAMILY alpha/beta-Hydrolases 70 495 IPR029058 -
Alju13g1066 506 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Alju13g1066 506 Gene3D - 351 389 - -
Alju13g1066 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Alju13g1066 506 Gene3D alpha/beta hydrolase 67 326 IPR029058 -
Alju13g1066 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 72 479 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 Pfam Serine carboxypeptidase 76 491 IPR001563 GO:0004185|GO:0006508
Alju13g1066 506 FunFam Carboxypeptidase 348 495 - -
Alju13g1066 506 FunFam Carboxypeptidase 398 492 - -
Alju13g1066 506 Gene3D - 398 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1066 Alju-ChrAlju13 29494629 29504229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1066 361 492 Calmodulin-binding Proteins AT2G22960 25.564 3.42e-10 57.8