Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1031 ATGGAATTCGAGAAAGGGAAAATTGTCAGATTCTTCTCGGATGGCAAAAATCATAAGGAACATGAACCACTGTGGCGAGGGACTGAACTATCAGCGCTGGAAAAGCCGTCATCTGGATACAGTGTTTCGTCAGCTTCCTCGCTTAAGCAAGATTATGCACTAACGTGGGGCAGAAATAGATTGGTTGAAACGTTTAAAGTTGGGGGATCTAAGGTGTTTCCGGAGGACCCTGAGCCATGGCGCAAAAGGATATTGGATCCATCTAGTGAGATTGTGTTGAAATGGAACCGAGTATTTATAGTTTCGTGCTTGATGGCTCTTTTTGTAGACCCATTGTATCTGTACTTGCCCAGCGTGAGAAGAGATGCAGAGTCTTCATGTGTGAGGACAGACCTGAACTTACGGATTGCTGTGACCTTTCTACGGACTGTCACAGACTTTTTCTATCTATTGCACTTGGTGATTAAGTTCCGGACAGCATATGTGGCACCTAGCTCGCGGGTATTTGGTCGTGGTGAACTTGTCACGGACCCAATGAAAATTGCTAGAAGATATATCAGATCTGATTTCTTCATTGATTTTGTTGCTACTCTGCCTCTTCCGCAAATACTCATTTGGTTTATTATACCAGCAACAAGAAGCCCTCTTGCTGATCAGAATAATAATGCTCTGGCATTGATTGTTCTGCTCCAATATGTTCCAAGATTATATTTGATCTTTCCACTAAGTTCTGAAATAATTAAAGCAACTGGAGTCGTTACAAAGACTGCATGGGCAGGAGCTGCATATAATCTGCTGTTGTATATGCTGGCCAGTCATGTCTCAGGGGCAGCTTGGTATCTTCTATCACTGGACCGTTATACCTTTTGTTGGAAATCTTTTTGCAAAAAGGATCCAAGTCCTAATTGCTTTCTTTATCTGGATTGTGATTCTCTTAACCTTGAGCAGCGCAAAACATGGGCAAATGTTACAAGCGTGTTTAACAACTGCGATCCCAATAATGGACAATTTAATTTTGGGATATTTGAACCTGCAGTGTCAAAACATGTTGTCTCCACAAACTTCATCTCAAAGTGTTTCTATTGTTTATGGTGGGGTTTGCAGCAACTTAGTTCTTATGGGCAGAACTTGGCGACGAGCACTTTTATGGGCGAGACATCATTTTCTATTCTGATCGCCATCCTGGGTCTTGTGTTGTTTTCACATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATAAGGCTTGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGCCAACTCCCTGAAGATTTGAAACGACGTGTTCGAAGATTTGATCAGTACAAGTGGCTGGCAACTCGTGGAGTTGATGAAGAAACAATTCTACGTGGATTACCTGCTGATCTTCGCCGTGATATCCAACGCCACCTATTCTTAGATCTTGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAACTATTAGATGCAATATGTGAGCGGCTGGAATCCTTTTTGAGCACTCAGGGCACCTACATTGTTCGAGAAGGAGACCCTGTGACTGAAATGCTCTTTATTGTTAGAGGTAGACTGGATAGTTCTACTACAAATGGTGGTCGGAGTGGTTTCTTCAATTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAGCTACTTGCTTGGGCCTTGCTTCCAAAATCAACCGTGAACCTGCCTTCCTCAACCAGGACTCTTAAATCACTTACCGAGGTTGAAGCTTTCGCTCTTCGAGCTGAAGACCTCAAGTTTGTGGCGAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCCCATCATTGGAGGTCTTGGGCTGCCTGCTTCATACAGGCTGCATGGCGTCGGTATAAGAAACGGATGTCTGCCAAAGATCTCGCTTTTAGGGAATCCTTCACTATGGATGAGAATGCGGCCAATGAGAGAGAACATGGGGACGAAAGTCCTGCTTATCCAAATTCTTCTCAGGCTAAATTAAACCTCGGCGTCACGTTACTTGCCTCAAGGTTTGCTGCAAACACTAGAAGGGGGGCTCTTAAGATTAAAGATGACCTGCCAAAACTACAAAAACCTGAAGAACCTGACTTTACTGCTGAAGCTGATGATGACTTATAA 2184 0.4377 MEFEKGKIVRFFSDGKNHKEHEPLWRGTELSALEKPSSGYSVSSASSLKQDYALTWGRNRLVETFKVGGSKVFPEDPEPWRKRILDPSSEIVLKWNRVFIVSCLMALFVDPLYLYLPSVRRDAESSCVRTDLNLRIAVTFLRTVTDFFYLLHLVIKFRTAYVAPSSRVFGRGELVTDPMKIARRYIRSDFFIDFVATLPLPQILIWFIIPATRSPLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVSGAAWYLLSLDRYTFCWKSFCKKDPSPNCFLYLDCDSLNLEQRKTWANVTSVFNNCDPNNGQFNFGIFEPAVSKHVVSTNFISKCFYCLWWGLQQLSSYGQNLATSTFMGETSFSILIAILGLVLFSHLIGNMQTYLQSTTIRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFDQYKWLATRGVDEETILRGLPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAICERLESFLSTQGTYIVREGDPVTEMLFIVRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLAWALLPKSTVNLPSSTRTLKSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRSWAACFIQAAWRRYKKRMSAKDLAFRESFTMDENAANEREHGDESPAYPNSSQAKLNLGVTLLASRFAANTRRGALKIKDDLPKLQKPEEPDFTAEADDDL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1031 727 FunFam Cyclic nucleotide-gated ion channel 1 488 606 - -
Alju13g1031 727 Gene3D Jelly Rolls 488 608 IPR014710 -
Alju13g1031 727 FunFam Cyclic nucleotide-gated ion channel 1 417 481 - -
Alju13g1031 727 SUPERFAMILY cAMP-binding domain-like 420 612 IPR018490 -
Alju13g1031 727 SMART cnmp_10 490 621 IPR000595 -
Alju13g1031 727 MobiDBLite consensus disorder prediction 706 727 - -
Alju13g1031 727 CDD CAP_ED 490 621 IPR000595 -
Alju13g1031 727 Gene3D Helix hairpin bin 418 480 - -
Alju13g1031 727 Pfam Ion transport protein 95 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju13g1031 727 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Alju13g1031 727 Gene3D - 99 414 - -
Alju13g1031 727 ProSiteProfiles cAMP/cGMP binding motif profile. 490 573 IPR000595 -
Alju13g1031 727 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Alju13g1031 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 77 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1031 Alju-ChrAlju13 29080389 29085425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1031 1 725 Ion Channels AT4G30360 66.894 0.0 980