Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1024 ATGAGCATGTCAAGCCAGATGAAAAAGAAGAGCTTTAACCTTTGCCTCTGGTTTCGTTGCTTTAGTACTTTACTATGGTTCTTTGTAGAACCTTCGAAGTCGAAGGAGGCACAAATACCAGTGGGTGTAGTTGTTGATCTCAACTCCTCAGTTGGAAGTATGGCCTTTCGCTGCATCCAAATGGCTCATCAAGATTTCTATAAAAACTATTCCCACTACCAAACAAGACTTGATCTTCGAATCAGGGATTCTGAGAATGATGTCGTTAGAGCAGCATCTGCAGCTTTCGAATTGATGAAGAATGAAAACGTGCATGCAATCATCGGACCTGTATTTTCAGAACAAGCGAGGTTCGTTATACAACTTGGGCACAAACTTCATGTTCCCATCGTCTCGTTTTCAGCCACAAGTCCATCTCTTTCTTCAATCCGAAGCAAATATTTCATAAGAACAGCACAAGATGATCGCTCACAGGTGAAGGCTATAGCTTTCCATTACGCCTTGGACAAAGTAAACACACGAGTGCCTTACAGAATTGTCATCGATCCAAATTCTGAGGAATATGAAATTTTAGAGCAGCTGAAGATGGTAAATCAGAGTCAAAAAAGAATATTTCTTGTTCACATGACTGGTCTTGTTGGGCACAAATTCTTCTTAGCTGTGAACAAGGCAGGAATGATGACGGAAGGGTATGGGTGGATAGTCACAGATGGGTTATCTAATGTGTTAGACCCTAATTTGGGTCCAAAAGTGATGGATTCTATGCAAGGTGTCTTAGGGGTAAGGCCAAAAGTGGAAAAGTCTAGAAGGCTTACAAAATCAGGAGTGTCAATGGTAGTTTCGATGAAGCCTGATGAGAGACAAAACATGTGGATATTCTTAAAGCCTTTGAGTCCAAGTCTTTGGCTGACCACTGGTGCAGCATTCGTCCTCACAGATGAAGAAAAATTTGATAGGATTATGAGCAAGTACTTCTCATCAAGACGAATCATATCTGAAGATGAAAGTATATCATCAATTCCAAACAGTCAGACTAGTCTTACTTTGTCCAGCTTTGGAGGGCTTTTTATCATCACAGGGGTCACTTCTGGGATTTCACTTCTCTTCTATTTGTTCAAGTTTGGATACTCTCAGTCAGAAGAAAGATCTCTATGGTTGTTACAGTTAAAGGCTCGAAAAATGAAGTGCTTATTGGACCGAAAGTATAACTCTGTATCATTGAATAGAAGCGATTCCAGAGTATTCCCAGCTGCAAATAATATTTTTGTAGAGAGAGATAGAGCCATTACTGCCCAGAAGGAACCAGAACAGCCAGAGCATAGTGACACCATTCAACGTGAGCATCAGTCATCATAG 1356 0.4078 MSMSSQMKKKSFNLCLWFRCFSTLLWFFVEPSKSKEAQIPVGVVVDLNSSVGSMAFRCIQMAHQDFYKNYSHYQTRLDLRIRDSENDVVRAASAAFELMKNENVHAIIGPVFSEQARFVIQLGHKLHVPIVSFSATSPSLSSIRSKYFIRTAQDDRSQVKAIAFHYALDKVNTRVPYRIVIDPNSEEYEILEQLKMVNQSQKRIFLVHMTGLVGHKFFLAVNKAGMMTEGYGWIVTDGLSNVLDPNLGPKVMDSMQGVLGVRPKVEKSRRLTKSGVSMVVSMKPDERQNMWIFLKPLSPSLWLTTGAAFVLTDEEKFDRIMSKYFSSRRIISEDESISSIPNSQTSLTLSSFGGLFIITGVTSGISLLFYLFKFGYSQSEERSLWLLQLKARKMKCLLDRKYNSVSLNRSDSRVFPAANNIFVERDRAITAQKEPEQPEHSDTIQREHQSS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1024 451 Pfam Receptor family ligand binding region 166 273 IPR001828 -
Alju13g1024 451 Pfam Receptor family ligand binding region 59 163 IPR001828 -
Alju13g1024 451 Gene3D - 170 262 - -
Alju13g1024 451 PANTHER OS06G0188250 PROTEIN 14 272 - -
Alju13g1024 451 Gene3D - 50 153 - -
Alju13g1024 451 SUPERFAMILY Periplasmic binding protein-like I 36 267 IPR028082 -
Alju13g1024 451 MobiDBLite consensus disorder prediction 431 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1024 Alju-ChrAlju13 28954863 28959733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1024 32 271 Ion Channels AT2G29120 41.948 2.97e-56 198