Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1021 ATGTATATGCATGATATGATTGATGGTGGGCTGAAACACCAACCTGTTGTGATTTTCTGCTATCCAGATAGGCCAAAGAATGACAAGGCTACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTAACTGCTGAAGTCAACAGACTAAAAGCTGAGCATGCTGCACTTTCTGAAGAATCACATGAACTAATGCAGGAGAAAAATGAACTCACAGAAGAGAAGATATCTCTAAAATCTGACATTGAAAATCTTAATGTACAATATCAGCAGAGAGTGAGAGTCACATTCCCATGGACTGCAATCGATCATTCAGTTGTCATGGCTCCACCGTATTCATATCCAGTTCCTATACCCATTCCTTCTGCTCCAATTTCCATTCATCCGTCACTTCAGCCTTTTCCTTTCTTTGGAAACCAAAATCCTTGTTCCACATATGTCCCTTTTTCTGCTCCTGCTAATCCCCCAGTCGAGCAGCCAACTGGCCAATATGCTTCAACGTCCAGTGCTTCAAGCAAACAAGATTCCAGAAGTAGGTTGCCGGATCATGAAAGGATAGGCAATGCTGAAAGATGCGGTGAGTCTAACGATGTAGCCACAGAGCTTGAACTTAAGATGCCTGGATCATCATTGCGGCAGATCAATAGGTTGATTGCTAAAATGGGTTTGAGTTCGGATTTGCGTATTGGGAATTCATTGATTTATATGAATTCAGAGTTTGGGGAAGTGAGAGCTGCACATGATGTGTTCGATGAAATGTCTAAGAGAGATGTGGCGCCTTGGACTTCCATGATCGATGGCTTTGTTGACAATGATCGACCTACTGAAGCAAGTATTGAATTTAATATGCATGTCAGATTGATGGGTTTAAACACATTGATGGTTCGAAGCAATGGGAAGTGGAAACGCGAAGATGAGGAAGAAGGGTACAAGTATATGAGGCTGGAGAGGAGAGTTCCTCAGAAGTTTCTGAGGAAATTATGGTTGCCGAAGAGAATGCCAATGTGGCAACCATCAATGCAAAATGCAAGAATGTTTGGAGTAGATTTGTCAGAATTGGTTCCTGAACCTTCGAAGGTGAAGGAGGCACAAATACGGATAGGGGTAGTTGATGATGATCTCAACTCCCCAGTTGGAAGTATGGACATTCGCTGCATAAAAATGGCTCATCAAGACTTCTATAAAAACTATTCTCATTACCAAACAAGACTTGATCTTCGAATCAGGGATTCTGAAAAAGATGTCGTCAGAGCCTCATCAACAGCCACAAGCCCATCTCTTTCTTCAACCCGAAGCAAATATTTCATAAGGACAGCACTAGATGATCGCTCACAGGTGGAGGCTATAGCCGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCTTATCTACGAAGTCACTAAGTATGGAAGGGGTTTGATCCCATATCTCGCAGACGAATTGGAAAACGCTAACACACGAGTGTCTAACAAAAGTGCCATCGATCCAAATTCGGTGGAATCTCAAATCTCTAAGGAGCTGAAGAAGATAAATCAAAGTGGAAAAAGAATATATCTTGTGTAA 1566 0.4195 MYMHDMIDGGLKHQPVVIFCYPDRPKNDKATILTDTIQVLKDLTAEVNRLKAEHAALSEESHELMQEKNELTEEKISLKSDIENLNVQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPIPSAPISIHPSLQPFPFFGNQNPCSTYVPFSAPANPPVEQPTGQYASTSSASSKQDSRSRLPDHERIGNAERCGESNDVATELELKMPGSSLRQINRLIAKMGLSSDLRIGNSLIYMNSEFGEVRAAHDVFDEMSKRDVAPWTSMIDGFVDNDRPTEASIEFNMHVRLMGLNTLMVRSNGKWKREDEEEGYKYMRLERRVPQKFLRKLWLPKRMPMWQPSMQNARMFGVDLSELVPEPSKVKEAQIRIGVVDDDLNSPVGSMDIRCIKMAHQDFYKNYSHYQTRLDLRIRDSEKDVVRASSTATSPSLSSTRSKYFIRTALDDRSQVEAIAAIVEAYGWHEIILIYEVTKYGRGLIPYLADELENANTRVSNKSAIDPNSVESQISKELKKINQSGKRIYLV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1021 521 MobiDBLite consensus disorder prediction 156 175 - -
Alju13g1021 521 Gene3D - 443 521 - -
Alju13g1021 521 Gene3D Tetratricopeptide repeat domain 196 296 IPR011990 GO:0005515
Alju13g1021 521 MobiDBLite consensus disorder prediction 176 191 - -
Alju13g1021 521 MobiDBLite consensus disorder prediction 150 194 - -
Alju13g1021 521 PANTHER TRANSCRIPTION FACTOR BHLH121 22 213 IPR044579 GO:0003700|GO:0006879
Alju13g1021 521 Pfam Receptor family ligand binding region 419 519 IPR001828 -
Alju13g1021 521 SUPERFAMILY Periplasmic binding protein-like I 382 520 IPR028082 -
Alju13g1021 521 Coils Coil 33 88 - -
Alju13g1021 521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1021 Alju-ChrAlju13 28919977 28925473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1021 22 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 53.000 1.69e-52 179