Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1017 ATGGGTTTGAGTTCGGATTTGCGTATTGGGAATTCATTGATTTATATGAATTCAGAGTTTGGGGAAGTGAGAGGTGCACATGATGTGTTCGATGAAATGTCTAAGAGAGATGTGGCGCCTTGGACTTCCATGATCGATGGCTTTGTTGACAATGATCGACCTACTGAAGCAAGTATTGAATTTAATATGCATGTCAGATTGATGGGTTTAGTAGAACACATTGGTGGTTCGAAGCAATGGGAAGTGGAAACGCGAAGATGGGGAAGAAGGGTGCAAGTATATGAGGCTGGAGAGGAGAGTTCCTCAGAAGTTTCTGAGGAAATTATGGTTGCCGAAGAGAATGCCAATGTGGCAACCATCAATGCAAAATGCAAGAATGAACCTTCGAAGGTGAAGGAGGCACAAATACGGATAGGGGTAGTTGATGATGATCTCAACTCCCCAGTTGGAAGTATGGACATTCGCTGCATAAAAATGGCTCATCAAGACTTCTATAAAAACTATTCTCATTACCAAACAAGACTTGATCTTCGAATCAGGGATTCTGAAAAAGATGTCGTCAGAGCCTCATCAACAGCCACAAGCCCATCTCTTTCTTCAACCCGAAGCAAATATTTCATAAGGACAGCACTAGATGATCGCTCACAGGTGGAGGCTATAGCCGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCTTATCTACGAAGTCACTAAGTATGGAAGGGGTTTGATCCCATATCTCGCAGACGAATTGGAAAACGCTAACACACGAGTGTCTAACAAAAGTGCCATCGATCCAAATTCGGTGGAATCTCAAATCTCTAAGGAGCTGAAGAAGATAAATCAAAGTGGAAAAAGAATATATCTTGTGTAA 879 0.4232 MGLSSDLRIGNSLIYMNSEFGEVRGAHDVFDEMSKRDVAPWTSMIDGFVDNDRPTEASIEFNMHVRLMGLVEHIGGSKQWEVETRRWGRRVQVYEAGEESSSEVSEEIMVAEENANVATINAKCKNEPSKVKEAQIRIGVVDDDLNSPVGSMDIRCIKMAHQDFYKNYSHYQTRLDLRIRDSEKDVVRASSTATSPSLSSTRSKYFIRTALDDRSQVEAIAAIVEAYGWHEIILIYEVTKYGRGLIPYLADELENANTRVSNKSAIDPNSVESQISKELKKINQSGKRIYLV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1017 292 Gene3D - 214 292 - -
Alju13g1017 292 Pfam PPR repeat 11 37 IPR002885 -
Alju13g1017 292 Pfam PPR repeat 41 57 IPR002885 -
Alju13g1017 292 SUPERFAMILY Periplasmic binding protein-like I 152 291 IPR028082 -
Alju13g1017 292 PANTHER OS06G0188250 PROTEIN 131 193 - -
Alju13g1017 292 Pfam Receptor family ligand binding region 190 290 IPR001828 -
Alju13g1017 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 6 40 IPR002885 -
Alju13g1017 292 Gene3D Tetratricopeptide repeat domain 1 69 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1017 Alju-ChrAlju13 28869727 28872402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1017 132 292 Ion Channels AT2G29120 33.831 9.28e-30 117