Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1013 ATGGCCACCCCAAATTACAATTATGCCTACCTTCTAATAATTGCTTGTGTTGTGTTGTTGTTAACAGCTCAGATTAGAGCAAGCGATGATAATATTGCTGCAGGTTCACTCTTAGGAGGCAAGAAGTTGATAATTGGAGTTCCCAAGAAACCAGCCAATGGCTTTGTCCAATTTGTGGATTTACAACTCAATTCAAGTAATAAGATTCAAGTAGTCAACGCTACGGACTATTCCATTGATGTCTTCTATGCTGTAATATCTTCCCTTAAGCGCTTTAATCACAATATTTCTTTTGAGTTTAGAGCTTTTGTAGATGAATATGGAAACAGTGCTGGGGATTACGACGCACTCGTCTATCAGATTTTCGAAGGAAAGTATGATGCTGTAGTGGGAGATTTGGCTATTGTGGCAAATCGTTCCAACTATGTGGATTATACATTACCATATAGACCGGGTGATATGAGGATGCTTGTGAAGGAGAATAAGTGGCCAGAGCAAGTTCTAGGCGTACTCATCGATAACTTGAAGATTGATAGTTCCAGGTTGAAGAGCTACTCCTCTGTTAAGGAGTATAAGGAGGCTTTGGACAAAGGAAGCCATGGAGGTGGTGTCGATGCTATTTTTAATGAAGTTTCCTACTTTAAGATCTTCCTCAAGCAATATGGTTCTAATAATTATGCCTTGATCCAAACCAAGCACCGCAATGCCGGATACGGTTTCGCATTCCCAAAAGGCTCCAACTTAACATCTTATTTTTCTAGAGCCACATTAAATGTGAGTGAGAGTGAAGAAATGGACCGAATTGAACAGAAATACTTTGGAAGCAGTAATGATATTGATGAAGGCCAAGATCTATCTTCTAATGGATCATCAGATTATAATAATGCAAGTGCTAGCCTTAGTGCTTATAGCTTTGCTGGTCTATTCATGGTGGATAGTGATGACAGAATATTATCTCCACTGTTTGAACTTTATTTGAAGCCTGTTAATTAG 993 0.3897 MATPNYNYAYLLIIACVVLLLTAQIRASDDNIAAGSLLGGKKLIIGVPKKPANGFVQFVDLQLNSSNKIQVVNATDYSIDVFYAVISSLKRFNHNISFEFRAFVDEYGNSAGDYDALVYQIFEGKYDAVVGDLAIVANRSNYVDYTLPYRPGDMRMLVKENKWPEQVLGVLIDNLKIDSSRLKSYSSVKEYKEALDKGSHGGGVDAIFNEVSYFKIFLKQYGSNNYALIQTKHRNAGYGFAFPKGSNLTSYFSRATLNVSESEEMDRIEQKYFGSSNDIDEGQDLSSNGSSDYNNASASLSAYSFAGLFMVDSDDRILSPLFELYLKPVN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1013 330 SMART GluR_14 68 275 IPR001320 GO:0015276|GO:0016020
Alju13g1013 330 Gene3D - 36 193 - -
Alju13g1013 330 Pfam Bacterial extracellular solute-binding proteins, family 3 113 274 IPR001638 -
Alju13g1013 330 Gene3D - 202 280 - -
Alju13g1013 330 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 170 310 IPR015683 -
Alju13g1013 330 SUPERFAMILY Periplasmic binding protein-like II 16 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1013 Alju-ChrAlju13 28803807 28810711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1013 172 311 Ion Channels AT5G11210 37.857 1.48e-22 96.7