Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1009 ATGAAAATCCCAAATCACTATTATGGCTGCCTTCTAATAATTACCTTTGTTGCCTTGTTAACAGCTGAGATTGGAGCAGGGGATGATGAAGCAGGTTCACTCCTAGGAGGCAAGAAGTTAATAATTGGACTTCCTAAGAAATCAGGTTTCACCCAGTTTGTGGATTTACAACTCAATTCAAGTAATAAGACTCAGGTCGTCAAGGCTACAGGCTATTCCATGGACGTCTTCGAAGCTGCAATAGCTTTTCTTGAGAGTTCTCGTTACAATATTTCTTACGAGTATAGAGCATTTGTAGACGAAGATGGAAAGAGTGCTGGAGATTACGATGCACTCGTCCCTAAGATTTTTGAAGGAAAGTATGGTGCTGTGGTGGGAGATGTGGCAATTGTGGCAAATCGGTCAAATTATGTGGATTTTACTTTACCATATGCACAGTCAGATGTGAAGATGCTGGTGAAGGTTCATAACGATCCAAGGTTGAAAATGTGGTTTTTTGTACAGCCTTTTAGTTGGGATCTGTGGTTGTCGATAGTCATGTTCAGTATTTCTATTGGAGGTATCATACTGTTCATGGAACGTACTATTGAGGAAGATTCAACACTTGAAAGTTCACCAACTAGGAAACAACTCAGCAAGTTTTCTATGATCCTGTGGCTTCCTGTGTTGCAAACAGTTCTTCCTGAAAGAGAATCATTGGTCAAGAATTGCTCTAGGTTTGTGCTAGTGATGTGGTTGATTCTAGTATTTGTACTAATGCAAAGTTACACGGCATGCTTGTCATCAATCTTGACCGTACATCAACTTCAACCACGATACATTAATGAGGACGATGTTATAAATAACCCCAAAATAAATATTGGATACCACTGTGACTCATTCATTAGAGGTTTGTTGGTTGATGACTTGGGGATTAATAGATCAAGGATGAAGAACTACACTGACATTGAAGAATATAAGGAGGCTTTGGATAAAGGAAGCTTTGACGGTGGCTTTGATGCTATTTTTGATCAAGTTTCCCACATTAATGTCTTCCTTTATCGATATGGTTCCAATTATGCAATGGTTGAAACCAGACATCGCACTGATGGATTTGCCTTTGCATTTCCCCTAGGCTCCAACTTAACCTCGTACTTTTCTAGAGCCATTTTAAATGTGAGTGAGAGTAAGAAAATGGATAAAATTGAGGAGAAATATTTTGGAAGCAAGGACAACAACAATGAAGGTCAAGGCCTATTGAATTCATCGTCAGATAATGCAAATTCTAGCCTCACGACTTATAGCTTTGCAGGTGAAGTAGTGTAA 1305 0.3916 MKIPNHYYGCLLIITFVALLTAEIGAGDDEAGSLLGGKKLIIGLPKKSGFTQFVDLQLNSSNKTQVVKATGYSMDVFEAAIAFLESSRYNISYEYRAFVDEDGKSAGDYDALVPKIFEGKYGAVVGDVAIVANRSNYVDFTLPYAQSDVKMLVKVHNDPRLKMWFFVQPFSWDLWLSIVMFSISIGGIILFMERTIEEDSTLESSPTRKQLSKFSMILWLPVLQTVLPERESLVKNCSRFVLVMWLILVFVLMQSYTACLSSILTVHQLQPRYINEDDVINNPKINIGYHCDSFIRGLLVDDLGINRSRMKNYTDIEEYKEALDKGSFDGGFDAIFDQVSHINVFLYRYGSNYAMVETRHRTDGFAFAFPLGSNLTSYFSRAILNVSESKKMDKIEEKYFGSKDNNNEGQGLLNSSSDNANSSLTTYSFAGEVV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1009 434 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 431 IPR015683 -
Alju13g1009 434 SMART GluR_14 39 402 IPR001320 GO:0015276|GO:0016020
Alju13g1009 434 SUPERFAMILY Periplasmic binding protein-like II 11 402 - -
Alju13g1009 434 Gene3D - 366 400 - -
Alju13g1009 434 Gene3D - 33 162 - -
Alju13g1009 434 Gene3D - 317 365 - -
Alju13g1009 434 Gene3D - 163 295 - -
Alju13g1009 434 Pfam Bacterial extracellular solute-binding proteins, family 3 106 401 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1009 Alju-ChrAlju13 28724849 28729058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1009 37 429 Ion Channels AT5G11210 35.443 2.84e-71 238