Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0976 ATGGATAGTCCTACTGCAATTCAACCTTCTATACCTGGTTTTGGTTTTATACCAGGTTTGGCACCTGGTTGCAATGATGATAGCCGACACGTTAAATTCTTATGTAGCTTTCTAGGAAATATAATGCCCCAACCCCTTAATGGTAAGCTTCGCTATGTTGGTAGAGAGACACGAATTGTGAATGTTCCAGGAGATATTGGCTCTAAGGAGTTGATGAAGTATGACAAATTGGGTTTAGGTGATGGATTTGTTAGGCTCAGAATTTTTTTGTTCTCACAATCAGAACAAGATGTTTTTTCACATTTCATTGATAAGGATGAGAGGGATTCTGAGACAAGGTATGTATCAGCATTGAATAATTTAAACGATGCTTCGGATTTTAGGAAGCAGCAACTAGGTGAGTTTCCTATGCTTGGTTCGGTTGAGGATATGCTTGGAGCTGATCAGTTTTTCAATTCAATCAGAGTGGATGGTAGCCTTCATAGCCAGAGAAGTGGTGTGGTGCCCATGACACATCTTAACTTGCATCGTCCCACACTACTTCACATTGCATCAGGGCAACATGAGCAACCTGTATCCCAGAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAGGGTATCAGATGCCATTTTCAGAGCTGCCAGATAAATGCCTTGATAGAATGCCAGAAGAATATACGCGGCTTCAGAGAAATCAATCTCTTTTTGAGCACCCAAATATTAGTAATGGAATTCCTCCAGTTGCTAATCAAAATGTGAAGTTGCATCCGGTTATGTATCCTAATGAGCCAAATTTTCCGCATCAAGCAAATAATCGGGTTGAGGAAGCAAGGAGCCATGTTTCTGGGTCAGGAAGACTGAATGATCATTATGTTCATGATGGTCGTGGCATAAGTTTCTCTCTTGGGCACGGCAGCATGGCTGATGGACATCCTTTGCCTTCAAATTATGTTCACCAAAGAGCTAGACCTGAATTGGGGCCTGAAGTGTTTCATGATCAAGCTGTAGCTAACACAGCCCATCCGCAAATTCCACCTTTGGAAGAGCACAGTGTGCGAAATACTCCAGCTCCACTTCATATTGGACCATCTTATGAGGCATCCAGTTCACCTGGACAGTTAAATGGTGTGATAAATGCAAGAATATGGGGAGAGAATAGTCCAAGAATTTACATTGGACCAAATAGTCAAAGTCCTTTGGTTGATTCCTCACACAAAATGCTAGGTCATGATGGATATCCCATCTCAGAATTCCCTTATAATCATGCTGTGAAGTTCAATCCAAAGACTCTTGGTCAAGATAATCAACACCCAGATGCTGTGGACACCATTCGTTCCCCACAGGACATGAATGTTGGCATTCGATTGGGACCAGTACGGCTACCAAAATCACCTTCTAATATGGCTCACAACAATGAGGTTTCAAACAGTGGCACTCATATATCTGAAGCAATGGGGTTGCTGAGTTTGCACGGTGAAGACAAAGGAGCAGAAAATGCAGACGAGGTTGAGAACTCTAATGCTCGGAGTATATCTTTTTCAGAGCAAAACAAAATCACTGAGAATAATAGTGAAGTCGCTGCTTCTGTTGAGTCTAAAAATGCAAAACCAGAACATGTTGAAGAATGTGGTGATGTTGCAAAACTAGTAGATCGGGATCTAACTGCCCCTGAAGATTCCAAGCGTCTAGCTACTCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCGTTTGAAGGAGCTAAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACTTCTCAGAGTCACAATTTAGCAATCAAAGATGACCCAGCAAATGCTGGAGAGTTAGGGACAATTAAAAATGATGATTTGGAAGAGATCCGCAAACTAGGTTCAGGAACTTATGGAGCTGTCTATCATGGGAAATGGAAAGATTTCTGGAAAGAGGCATCGATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGTATTGTCCATGATGGCCCTGATGGTTCTTTAGCAACTATGACGGAGTTCATGATTAATGGATGCCTGAAACAGTTATTGCATAAGAAAGATAGAACTATAGATAGCTGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATAGAGTATTTACATGGAAAGAACATTGTGCACTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCGCAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAACACACACTAGTATCTAGTGGGGTGCGTGGAACATTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTTGGGATTATTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATCGTGAACAACACAATTCGTCCCCAGATCCCGACACGGTATGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCAGCAGAGAGGCCATCCTTCTCAGAAATCTCAAGGAAGCTAAGGAGTATGGCTGCGCAAATGAATGTGAAATAG 2619 0.4208 MDSPTAIQPSIPGFGFIPGLAPGCNDDSRHVKFLCSFLGNIMPQPLNGKLRYVGRETRIVNVPGDIGSKELMKYDKLGLGDGFVRLRIFLFSQSEQDVFSHFIDKDERDSETRYVSALNNLNDASDFRKQQLGEFPMLGSVEDMLGADQFFNSIRVDGSLHSQRSGVVPMTHLNLHRPTLLHIASGQHEQPVSQRSVVEFPSSPSSAGYQMPFSELPDKCLDRMPEEYTRLQRNQSLFEHPNISNGIPPVANQNVKLHPVMYPNEPNFPHQANNRVEEARSHVSGSGRLNDHYVHDGRGISFSLGHGSMADGHPLPSNYVHQRARPELGPEVFHDQAVANTAHPQIPPLEEHSVRNTPAPLHIGPSYEASSSPGQLNGVINARIWGENSPRIYIGPNSQSPLVDSSHKMLGHDGYPISEFPYNHAVKFNPKTLGQDNQHPDAVDTIRSPQDMNVGIRLGPVRLPKSPSNMAHNNEVSNSGTHISEAMGLLSLHGEDKGAENADEVENSNARSISFSEQNKITENNSEVAASVESKNAKPEHVEECGDVAKLVDRDLTAPEDSKRLATQFSFLPELIASVKKAAFEGAKEVKARAKEHTTSQSHNLAIKDDPANAGELGTIKNDDLEEIRKLGSGTYGAVYHGKWKDFWKEASILSSLHHPNVVSFYGIVHDGPDGSLATMTEFMINGCLKQLLHKKDRTIDSCKRLIIAMDAAFGIEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSSGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIIMWELLTGDEPYADMHCASIIGGIVNNTIRPQIPTRYDPEWKSLMESCWASDPAERPSFSEISRKLRSMAAQMNVK 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0976 872 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 687 872 - -
Alju13g0976 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Alju13g0976 872 PANTHER SERINE-THREONINE PROTEIN KINASE 299 864 - -
Alju13g0976 872 SUPERFAMILY Protein kinase-like (PK-like) 616 860 IPR011009 -
Alju13g0976 872 PRINTS Tyrosine kinase catalytic domain signature 833 855 IPR001245 GO:0004672|GO:0006468
Alju13g0976 872 PRINTS Tyrosine kinase catalytic domain signature 718 736 IPR001245 GO:0004672|GO:0006468
Alju13g0976 872 PRINTS Tyrosine kinase catalytic domain signature 681 694 IPR001245 GO:0004672|GO:0006468
Alju13g0976 872 PRINTS Tyrosine kinase catalytic domain signature 789 811 IPR001245 GO:0004672|GO:0006468
Alju13g0976 872 Gene3D Transferase(Phosphotransferase) domain 1 685 872 - -
Alju13g0976 872 ProSiteProfiles Protein kinase domain profile. 625 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0976 872 SMART serkin_6 625 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0976 872 CDD STKc_MAP3K-like 631 862 - -
Alju13g0976 872 Gene3D Phosphorylase Kinase; domain 1 612 684 - -
Alju13g0976 872 Pfam Protein tyrosine and serine/threonine kinase 645 862 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0976 Alju-ChrAlju13 28241154 28246247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0976 25 872 MAP Kinase Kinase Kinase AT5G57610 40.538 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Alju13g0976 PK_Tyr_Ser-Thr 1.4e-51 CL0016