Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0958 ATGGATTCGTCTTTTGAAGGTGCCACACTTGATCCATCTAAATGCAGCAAGTTGAGTATGGAAGAAAAAAGAGTACTTATCTATGAGATATCTAAGTCACAGGGTGCATCAGAGATGTTACAGTCATGGAGCCGACAAGAGATTTTGAAAATTCTGTGTGCAGAGATGGGTAAAGAAAGAAAGTATACTGGCTTGACAAAGTTGAAAATCATAGAAAATCTTTTAAAAATTGTCTCTGAAAAGAAATCTGGAAACCAGGAAATTACAACAGATCTTGAACCACTTTCTCCTTCAACAAATGAGCAGAAACCAGCTAAAAGGCAGAGAAAAACAGAGAGTCCGTCTCGACTGCCTATTCCAGCAAGCAATGGTCCAATCACTAACGGCGATGGAGATTTAGGCAGTAGTAGCACTACATATTGTAAAAATTCAGCTTGCAAAGCCACCCTAAGTCAAGCAGATGTATTTTGCAAAAGATGCTCGTGCTGCATTTGTCAGCAATATGATGACAACAAAGATCCTAGCCTGTGGTTAATATGTAACTCTGACCCTCCATTTCATGGTGTTTCTTGTGGCTTGTCATGCCATCTTGAATGTGCTTTAAAACATTATGGTTCTGGCATTGCCAAAAATGGAGTGCATCCCAAGCTTGATGGGAGTTTCTACTGTGTCTCATGTGGGAAAGTAAATGATTTGCTCGGATGTTGTAGAAAACAATTGTCAATGGGAAAGTGCACCAGGCGTGTGGACATTCTCTGCTATCGTCTCTCCTTGACCCAAAAACTTTTACAAGGGACTGAAAAGTATAAAATCCTTTATGAAATAATTGATGAGGCTGTGAAGAAACTTGAACCTGAGGTTGGCCCATTAACTAGCTCACCAGTGAAGATTGGTAGGGGAATTGTGAACAGACTTTCATCAGGACCAGAGGTCCAGAAACTCTGTGGTTCTGCTTTGGAATCGCTGGATTCATCACTTTATGAAATGCTCTTGCCTCCATCATCTAGTCCGACATATCCAGATACAAAATTGGTCGCTTCAGATATGGTGGGATTTGAAGATGTCACTGCAACATCACTGACTGTAGTTTTGGGCTCTGAAAATCCATCTGGGGAAAATATTGTTGGTTACAACTTGTGGCATCGGGTGGCTCATGACACGGACTATCCCTTGGATTCAACTTGCACATTGCATCCACCAGACAGAAGGTTCACCATCAGGGATCTAATTCCAGCCACAGAATACATCTTCAAAGCTGTTGCCTTCAATCATTCGAGGGAGTTGAGCACGTGTGAAGTCCATGTTTTGACGGAGCAAGGTGAGGAAGAAGCACCCAACTGCTCAACAACAGAAAGAAGTCAGAGCCCAGTAACAAACTGTAGCAGCCTTTCCAATCCTTCTTCAGTAGAAGATGAAATTAACAACAGTAATCCATATTGTGACCAGACCAATAACCGAGTGGAGAATCATCGTGCTGACCAAAAGGACACCGACAAACTTGCTTCAGGAATTTTATCCAATGACCCCACTAACTGTTCCAACATAGGCGAAGGTAGACTTCCAGCAGATGCTGATTCCTTACCGGACAAGGAACATACTGCAGGAAAGACTGGGCCTTTACCTTGTTCTGAAAATAAGCACTCGCCAGAGGAGCAAGTCACTGAGGACATGGGCATTAATAACGGGCTTAATTCTTCAGTTCAGGCTGGGAGGGACGGTGTGTTATTAGCAGGTAGCTCAGAGGAAGGCCTTCCCATTACTCCATGCAAGTTGGAAATGCTTAAGGATGGACCGGGAAGAAAGGGGAAGTCCAAATCCAGTGGCAAGGATCAAGAAAATGAGTCTGGGAAGAGAAAATGCCCTCAAGACGGAACCAAATCAAAGAAGAGAAATGGGGAAAGGCAGCAACAAGGTGAGGAGTGTGATGCAGATGGGTTTTCTTCTGATGGGGATTTTGAGTATTATGTTAAAGTGATTAGAAGGTTAGAGTGTGAAGGACATATAGAGAAGAACTTTAGACAGAAATTTCTGACTTGGTACAGCTTGAGAGCTACAGCCCAAGAAATTAGGGTTGTGAAAGTATATATTGATACCTTCATTGAAGATCCAACTTCTCTTGCAGAGCAGCTTGTGGACACCTTCTCAGATTGCGTATCAAGCAAGAAAACACCTATGGTGCCACCTGGGTTCTGCATGAAGCTTTGGCATTAG 2211 0.4283 MDSSFEGATLDPSKCSKLSMEEKRVLIYEISKSQGASEMLQSWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGNQEITTDLEPLSPSTNEQKPAKRQRKTESPSRLPIPASNGPITNGDGDLGSSSTTYCKNSACKATLSQADVFCKRCSCCICQQYDDNKDPSLWLICNSDPPFHGVSCGLSCHLECALKHYGSGIAKNGVHPKLDGSFYCVSCGKVNDLLGCCRKQLSMGKCTRRVDILCYRLSLTQKLLQGTEKYKILYEIIDEAVKKLEPEVGPLTSSPVKIGRGIVNRLSSGPEVQKLCGSALESLDSSLYEMLLPPSSSPTYPDTKLVASDMVGFEDVTATSLTVVLGSENPSGENIVGYNLWHRVAHDTDYPLDSTCTLHPPDRRFTIRDLIPATEYIFKAVAFNHSRELSTCEVHVLTEQGEEEAPNCSTTERSQSPVTNCSSLSNPSSVEDEINNSNPYCDQTNNRVENHRADQKDTDKLASGILSNDPTNCSNIGEGRLPADADSLPDKEHTAGKTGPLPCSENKHSPEEQVTEDMGINNGLNSSVQAGRDGVLLAGSSEEGLPITPCKLEMLKDGPGRKGKSKSSGKDQENESGKRKCPQDGTKSKKRNGERQQQGEECDADGFSSDGDFEYYVKVIRRLECEGHIEKNFRQKFLTWYSLRATAQEIRVVKVYIDTFIEDPTSLAEQLVDTFSDCVSSKKTPMVPPGFCMKLWH 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0958 736 MobiDBLite consensus disorder prediction 500 514 - -
Alju13g0958 736 SUPERFAMILY Fibronectin type III 352 425 IPR036116 GO:0005515
Alju13g0958 736 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 736 IPR044514 GO:0010048|GO:0040029
Alju13g0958 736 MobiDBLite consensus disorder prediction 442 485 - -
Alju13g0958 736 CDD FN3 350 423 IPR003961 GO:0005515
Alju13g0958 736 MobiDBLite consensus disorder prediction 86 102 - -
Alju13g0958 736 ProSiteProfiles Fibronectin type-III domain profile. 345 440 IPR003961 GO:0005515
Alju13g0958 736 MobiDBLite consensus disorder prediction 594 640 - -
Alju13g0958 736 MobiDBLite consensus disorder prediction 86 129 - -
Alju13g0958 736 MobiDBLite consensus disorder prediction 115 129 - -
Alju13g0958 736 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Alju13g0958 736 CDD PHD_VIN3_plant 161 226 - -
Alju13g0958 736 Gene3D Immunoglobulins 348 461 IPR013783 -
Alju13g0958 736 MobiDBLite consensus disorder prediction 587 644 - -
Alju13g0958 736 MobiDBLite consensus disorder prediction 440 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0958 Alju-ChrAlju13 28052965 28057230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0958 1 475 PHD Gene Family AT4G30200 55.731 2.05e-164 486