LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g0957	ATGAGGTATATCCGAACCAGCAGCCTCAAGAGGCTCTTCTCCTTGAAACGACGCAGTTTCGATGAGCCAGTTCCCACCAGCGATGAAAAAGTTGGCAACTTTGAGGTTCTTCCACCCCCAGAACAGTCTCCTAAAAGACCCACTTGGAAATGCTTCTCCTACGAAGAACTCTTCGATGCCACCAATGGCTTCAGCTCAGAGAATTTGGTCGGAAAAGGAGGCTACGCGCAGGTTTACAAGGGGACATTGAAAGATGGGAACGAGATTGCGGTGAAGAGGCTCACAAGAACTTCGAGCGATGAGAGGAAAGAGAAGGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTTAATCATCCAAATGTATTGCCTCTTCTGGGTTGTTGTATGGACAAGGGGCTTTACCTTGTCTTTGAGCTTTCATCCAAAGGTTCTGTTGCCTCTCTTCTTCATGATCAAAACTTGCCTCCCATGGACTGGAAAACAAGACATAAGATAGTTCTTGGGACTGCTCGTGGTCTTCATTACTTGCACAAAGGCTGCAAAAGAAGGATAATCCATAGAGACATCAAGTCCTCAAACATTCTATTAACTTCAGAATTTGAACCACAGATATCTGATTTCGGGCTGGCAAAATGGCTTCCTAATCAATGGACTCATCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATCTGGCACCAGAATACTATTTACATGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTATGGGGTTTTCTTGCTTGAAGTCATCTCAGGGAGGAAACCGGTGGACGGCTCTCACCAAAGCTTACACAACTGGGCAAAACCATTATTGAACAAAGAGGAAGTGGAAAAGCTGGTAGATCCAAAGCTAGAAGGGGCCTACGATTTAGCTCAGTTACAAAGACTTGCATTTGCAGCTTCTCTCTGTATTCGAGCTTCTGCAACGTGGCGACCTACCATGAGCCAGGTATTGGAGGTAATGGAGGAGGTAGAAATGAACAAAGAGAAGTGGAAGATGCCAGAGGAAGAGGAAGAAGAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATGTGAATATGAAAGTTCATTCTCTCTGACTCTACCAGACTCCATTGCAAGCTCTTAA	1140	0.4465	MRYIRTSSLKRLFSLKRRSFDEPVPTSDEKVGNFEVLPPPEQSPKRPTWKCFSYEELFDATNGFSSENLVGKGGYAQVYKGTLKDGNEIAVKRLTRTSSDERKEKEFLTEIGTIGHVNHPNVLPLLGCCMDKGLYLVFELSSKGSVASLLHDQNLPPMDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKSSNILLTSEFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAYGVFLLEVISGRKPVDGSHQSLHNWAKPLLNKEEVEKLVDPKLEGAYDLAQLQRLAFAASLCIRASATWRPTMSQVLEVMEEVEMNKEKWKMPEEEEEEEEEFWGFEDLECEYESSFSLTLPDSIASS	379

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g0957	379	Pfam	Protein kinase domain	66	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0957	379	FunFam	Putative receptor-like serine/threonine-protein kinase	142	356	-	-
	Alju13g0957	379	MobiDBLite	consensus disorder prediction	22	43	-	-
	Alju13g0957	379	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	185	197	IPR008271	GO:0004672\|GO:0006468
	Alju13g0957	379	ProSitePatterns	Protein kinases ATP-binding region signature.	70	92	IPR017441	GO:0005524
	Alju13g0957	379	FunFam	Putative receptor-like serine/threonine-protein kinase	34	140	-	-
	Alju13g0957	379	PANTHER	OS08G0249100 PROTEIN	41	361	IPR046958	-
	Alju13g0957	379	SUPERFAMILY	Protein kinase-like (PK-like)	40	332	IPR011009	-
	Alju13g0957	379	Gene3D	Phosphorylase Kinase; domain 1	39	140	-	-
	Alju13g0957	379	SMART	serkin_6	64	331	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0957	379	ProSiteProfiles	Protein kinase domain profile.	64	334	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0957	379	Gene3D	Transferase(Phosphotransferase) domain 1	142	358	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g0957	Alju-ChrAlju13	28031868	28035995	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g0957	52	335	Trihelix Transcription Factor Family	AT5G38560	44.898	2.23e-75	244

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Alju13g0957		Pkinase	5.2e-42	CL0016