Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0955 ATGATTCCGAGAAAGTTTGTGAAGAAATATGGGGATGTCTTCTCTGACACAGTGTTTCTGAAGCTTCCAAATGGTGAAGAATGGAAAGAAATAGACTATCCTTCAAATCATGGCGTCAAAGCTAAGCAACAAGAAGAATCACCTAGCGGAACAAGAAAGAACAACCCAGCATTACCTTGTCGCCTTCAACAAGATGCATATTTGTTTGACACCAGCAAAAACTGCAAAGCAGGTAGCCGACGAGGCAGGTTTAATTCTAAGGTGCTTAAAGTGAAAGGTGAAGCTGTTCAGGGGAATAGAGGAGGAGCACTTGACAGAGCCAAAGCTTTCAAATCTCAGTGTCCCTCTTTCATGATTGTTGCTAGACCATCCTACATTAATGCTTCTTGTCAAGTGGACAGTGACTTGAAAGTAGATGATGTTTGTGTTTTTGAGCTCATCAAAGGACCAACTCATCATGAACTCAATTTTCGGGTTTCAATCTTTCGAAATATGAACAATCCTTCTCCTTTGTCTAAATCTCAAGCTAAAAGAAAGCATACCGTTACCAGTGGCCAAGGACAGAAAAACAAGAGGGTGAAAATTGAAACAGAGACTAAGGAGCTTCAAGTTCCTCCAAAGAAGCCTAAATTTACAAAAGCTACTTCTTCTAAAGAATCTTCTGCTGTTCATATTTTCAACTCAGAAAACCCCTTCTTCAAAAGTGACCATAGGAAAATCCCAACATACTCAGTGCCATTGGGTTTTGTAAGGAAGTATTGGGAACAAGGGAAACATGTTGCAGAGCTGCAGGTTAGGGATAAATCAATGAGGGTTAAGTTGATCATATCTTGTTGGGGATCACGGGAATATGGCTTCTTTTCAGAAGGATGGGCTGCATTTCTAAGAGAGAATGATCTACAAAAAGGCGATGCTTGCTTCTTTGACCTTCTGAATAGGGATGACTTCTATGTCATGAAAGTTTCCATTTTCAAACGCTCCTTAACTTAA 990 0.401 MIPRKFVKKYGDVFSDTVFLKLPNGEEWKEIDYPSNHGVKAKQQEESPSGTRKNNPALPCRLQQDAYLFDTSKNCKAGSRRGRFNSKVLKVKGEAVQGNRGGALDRAKAFKSQCPSFMIVARPSYINASCQVDSDLKVDDVCVFELIKGPTHHELNFRVSIFRNMNNPSPLSKSQAKRKHTVTSGQGQKNKRVKIETETKELQVPPKKPKFTKATSSKESSAVHIFNSENPFFKSDHRKIPTYSVPLGFVRKYWEQGKHVAELQVRDKSMRVKLIISCWGSREYGFFSEGWAAFLRENDLQKGDACFFDLLNRDDFYVMKVSIFKRSLT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0955 329 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 188 327 IPR044837 -
Alju13g0955 329 Gene3D - 210 327 IPR015300 -
Alju13g0955 329 Pfam B3 DNA binding domain 233 323 IPR003340 GO:0003677
Alju13g0955 329 MobiDBLite consensus disorder prediction 40 57 - -
Alju13g0955 329 SUPERFAMILY DNA-binding pseudobarrel domain 232 320 IPR015300 -
Alju13g0955 329 ProSiteProfiles B3 DNA-binding domain profile. 228 327 IPR003340 GO:0003677
Alju13g0955 329 CDD B3_DNA 232 325 IPR003340 GO:0003677
Alju13g0955 329 MobiDBLite consensus disorder prediction 168 190 - -
Alju13g0955 329 SMART B3_2 232 327 IPR003340 GO:0003677
Alju13g0955 329 MobiDBLite consensus disorder prediction 168 191 - -
Alju13g0955 329 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0955 Alju-ChrAlju13 27964716 27967608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0955 2 325 B3 DNA Binding Superfamily AT3G18990 23.229 6.20e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju13g0955 B3 5.3e-10 CL0405