Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0953 ATGAGTTTTGTGTTTTCTCCACCGTCGTTTCATAGTTCTTCTTCATACGATGATTTTCAGACACAAGCTCAAGATACGTTCAATAAATTCGGTGACAATGTTAATTATACGATGAAATGGGCAGTGGCTGAGTCTATTGTTTATGGGGTGGTGGTGATAATAGCCATTATAGCAATAGTATACGCCATTGTTGAGTGCTTGAAGAAAGCAGGATCAGCAATTCCAGCTTACACCCAGATTCCAACCACAGAAAATAACCATAAAGCTTCAGATTCACGTCCTTCAAAGAACAAAGAAATTACATTAGCAATGCCACCAGATTCACAAGAAGTTGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCACCTGAGGAACTTGAACATATCACAAACAACTACACAACTATTTTGGGTTCTGGTGCTTTTGGTGTTGTTTATGAAGGTGAATTGTCAAATGGACAACAAGTTGCAGTCAAAGTTCTCAACAGTATGGATCTTGGGACAGAAGAACAATTCAAAGCAGAAGTTAGCACTATTGGAAGAACTTACCATATCAATTTAGTTATGCTTTATGGCTTCTGCTTCCACCGCGACAAGCGAGCTCTTGTATATGAGTTTGTCCACAATGGATCTCTCAACAATTTATTATTTGGCAGTCTCAACAGAGAAGTTGAGTTTGGGAAGCTTCATGAGATTGCCATTGGAACAGCGAAAGGAATCGCTTACTTACATGAAGAGTCGGTGATGCTTTCTCTGTGTGGGATTGAAGAGAAAGACAGGGAAAAAGCTCGGAGAATGATAATGGGTGATATGGAAATCCGTACACCATCATTTCCATTTCAGAATCTGGTGTCTTTTCAACCACCTTTGACTTCACAGGGAACTAATAATGAAGATTCAGATGCTTCTACTTCATGGTTGACAGAATCTTCTGAACAATCTGATTCTAAACCTTCCAACAACATATTCCATATAGAAAAATCTTCATAG 1020 0.3882 MSFVFSPPSFHSSSSYDDFQTQAQDTFNKFGDNVNYTMKWAVAESIVYGVVVIIAIIAIVYAIVECLKKAGSAIPAYTQIPTTENNHKASDSRPSKNKEITLAMPPDSQEVEFATMERFLNNINQEKPIRFSPEELEHITNNYTTILGSGAFGVVYEGELSNGQQVAVKVLNSMDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVHNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGIAYLHEESVMLSLCGIEEKDREKARRMIMGDMEIRTPSFPFQNLVSFQPPLTSQGTNNEDSDASTSWLTESSEQSDSKPSNNIFHIEKSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0953 339 FunFam S-receptor-like serine/threonine-protein kinase 110 216 - -
Alju13g0953 339 Pfam Protein tyrosine and serine/threonine kinase 145 258 IPR001245 GO:0004672|GO:0006468
Alju13g0953 339 Gene3D Transferase(Phosphotransferase) domain 1 125 316 - -
Alju13g0953 339 ProSiteProfiles Protein kinase domain profile. 141 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0953 339 MobiDBLite consensus disorder prediction 298 339 - -
Alju13g0953 339 ProSitePatterns Protein kinases ATP-binding region signature. 147 169 IPR017441 GO:0005524
Alju13g0953 339 SUPERFAMILY Protein kinase-like (PK-like) 123 255 IPR011009 -
Alju13g0953 339 PANTHER OS07G0415500 PROTEIN 106 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0953 Alju-ChrAlju13 27952735 27954906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0953 130 258 Receptor kinase-like Gene Family AT5G38280 40.000 3.38e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Alju13g0953 PK_Tyr_Ser-Thr 1.6e-20 CL0016