Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0952 ATGTATGGTTTTGAAATTGATTGGTTTTTCATTTTGGTGAAAACTTCATATTTGGTGGCAACTAGCTCAACCATGGCATCTTCAACCATGGCCTCTTTATGGAGGGCAAAACCCACTCGCATCATTATCATTATCACGGTTTTCCTTATTGCCTGGTTACTGATGTTGATCTTATACGGAAAACAAATCATTCTCATGGTCGGCCTGGGCGTGTTTTTTGGCTTATTAGTATTTGGCATATTTCAGTATCGTAAAAGATTTAATCAGGACAAAAGGCGTCACAAAGAGTTTCTGACATTAACTATGGAAAAGTTTCTAGATGATTTGGAAAGAGAGAGCCCAACAATGTTCACCTCAGACAACCTAGTACGTGCAACAAACAACTACTCCGACATGTTGGGGTCAGGAGGTTTTGGATCAGTCTATAAAGGAATTTTCAGTGATGGAACTGTTGTTGCAGTCAAAGTTTTACATGGCACTTTTGACGAGAGAATGGAGCAGCAATTCATGGCTGAAGTCGGCACAATTGGAAAAGTTCGTCATTTAAATCTGGTTCGCCTCATAGGATTTTGCATTGAAAAGAATATGACAGCTCTAGTTTATGAGTACATGAGCAATGGCTCTCTTGACAAATATCTGTTTAGTGAAAATAAGGACTTAGCATTTGAGATGCTACATGATATTGCAGTTGAAACAGCCAAAGGAATTGCTTACTTACATGAAGATTACCACGAGAGGATCATCCATTACGACATAAAACCAGAGAACATCCTTTTGGATGATAATTTGCATCCTAAAGTTGCTGATTTTGGTTTAGCCAAGCTTTCTAACAGAGAAAAGTCATATGTCACAATGACACGTCAAAGAGGAACACCAGGTTATGCTGCACCAGAACTTTGGATGCCTTTTCCAGTAACACACAAATGTGATATTTATAGCTTTGGAATAATGTTATGTGAAATCATAGGAAGAAGAAGACATTTTGATGCGAGCCTCCCAAAAAATCAACAGTGGTTTCCAAGATGGGTTTGGATAAAGTTTGAAAATAAAAATCTAGAAGAGCTGGTAACAGAATGTGGTAATATTGAAGATAAAGACGAAGAGAAAGTGAAAAGAATGATAAGGATAGCTTTGTGGTGTATTCAGTATAGACCAGATTTGAGACCTAAAATGAGTGATGTGGTGAAAATGTTGGAAGGCTCCGTGGATGTTCGAGAACCTTCAAACCCATTTCAACAATTGTTGGAAGAAAATCATGGAACTGAAGCATCACAAATGGATAGTGTTAGTGATGATGATGGCCCATCTACTCTTGAGGGAACCAAATCTTCCATTGTGCCTTCTCCTCCTGAGCTTGATTATTGA 1365 0.3832 MYGFEIDWFFILVKTSYLVATSSTMASSTMASLWRAKPTRIIIIITVFLIAWLLMLILYGKQIILMVGLGVFFGLLVFGIFQYRKRFNQDKRRHKEFLTLTMEKFLDDLERESPTMFTSDNLVRATNNYSDMLGSGGFGSVYKGIFSDGTVVAVKVLHGTFDERMEQQFMAEVGTIGKVRHLNLVRLIGFCIEKNMTALVYEYMSNGSLDKYLFSENKDLAFEMLHDIAVETAKGIAYLHEDYHERIIHYDIKPENILLDDNLHPKVADFGLAKLSNREKSYVTMTRQRGTPGYAAPELWMPFPVTHKCDIYSFGIMLCEIIGRRRHFDASLPKNQQWFPRWVWIKFENKNLEELVTECGNIEDKDEEKVKRMIRIALWCIQYRPDLRPKMSDVVKMLEGSVDVREPSNPFQQLLEENHGTEASQMDSVSDDDGPSTLEGTKSSIVPSPPELDY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0952 454 FunFam serine/threonine-protein kinase PBS1-like 98 203 - -
Alju13g0952 454 Pfam Protein tyrosine and serine/threonine kinase 130 398 IPR001245 GO:0004672|GO:0006468
Alju13g0952 454 ProSiteProfiles Protein kinase domain profile. 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0952 454 SMART serkin_6 127 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0952 454 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Alju13g0952 454 Coils Coil 345 365 - -
Alju13g0952 454 Gene3D Transferase(Phosphotransferase) domain 1 204 416 - -
Alju13g0952 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Alju13g0952 454 SUPERFAMILY Protein kinase-like (PK-like) 110 399 IPR011009 -
Alju13g0952 454 PANTHER OS07G0415500 PROTEIN 64 412 - -
Alju13g0952 454 MobiDBLite consensus disorder prediction 411 454 - -
Alju13g0952 454 MobiDBLite consensus disorder prediction 411 444 - -
Alju13g0952 454 FunFam Putative receptor-like protein kinase 204 406 - -
Alju13g0952 454 Gene3D Phosphorylase Kinase; domain 1 101 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0952 Alju-ChrAlju13 27941132 27943332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0952 124 438 Receptor kinase-like Gene Family AT5G38280 40.867 3.26e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Alju13g0952 PK_Tyr_Ser-Thr 9.2e-50 CL0016