Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0946 ATGAGTTCGAGTTTCAAGTCTCCTCCACCGCTATTAACTATCTCAAACGATGATATTTTTCGGACACCGCCAAATCCGTTTCAAGAATTCAGTGACACGGTTGATTCTTCCATGAAATGGTCAACAGCTGCAATAGTCGTTGTCACGGTGGTGGTGATTATAGCCATTATAGCAATAGCATACACCATTGTTAAGCGCTTGAGGAAAGCACCAACAATGTCATTGATTCCATCTCAAATCCAGATTTCAATAACAGATCATAAGGCTTCAAACAACAACAACAAGGAAATTGCATTAGCAATACCACCAGATTCAGATTCACAAGAAGAAATGGAGTTTGCAACTATGGAAAGATTTCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCCCCTGAGGAACTCAAACAAATTACAAACAACTATACAACTATTTTGGGTTCTGGTGCTTTTAGGGTTGTTTATAAAGAGAATATACTTCTTGGCCTGAACTTGGAACCAAAAGTAGCAGATTTTAGTTTTGCGAAACTTTGTAGCAAAGAAAGTAGCCATGTGAATATGTCACACTTCAGAGGAACAAGAGGGTATGCTGCACAAGAATTGTGGAAGCTTTATCCTGTGAATCATAAGTGTGATGTTTATAGTTTTGGTATTGTTCTGTTTGAAATTGTAGGGAGGAGAAGGCATTTTGATAGTGGTTACAGTGAATCACAACAATGGCTTCCAAAATGGGCATGGGACATGTTTGAGAACAATGAATTACCAATAATGTTGTCTCTTTTTGAGATTGAAGAAGATGAAGACAGGAAAAAAGCTGAGAGAATGATAATGGTGGCTCTTTGGTGTGTTCAATATTTGCCTACTGATAAGCCTCTTATGAGTGACATGGTGAAGATGTTGGAAGGTGACATAGAAATCTATCCACCACTTACCATTTCCCCTTCAGAATTTGGTGTCTTCAAAGCCAAATTTTACACTATAGGGAACCAATAA 996 0.3815 MSSSFKSPPPLLTISNDDIFRTPPNPFQEFSDTVDSSMKWSTAAIVVVTVVVIIAIIAIAYTIVKRLRKAPTMSLIPSQIQISITDHKASNNNNKEIALAIPPDSDSQEEMEFATMERFLNNINQEKPIRFSPEELKQITNNYTTILGSGAFRVVYKENILLGLNLEPKVADFSFAKLCSKESSHVNMSHFRGTRGYAAQELWKLYPVNHKCDVYSFGIVLFEIVGRRRHFDSGYSESQQWLPKWAWDMFENNELPIMLSLFEIEEDEDRKKAERMIMVALWCVQYLPTDKPLMSDMVKMLEGDIEIYPPLTISPSEFGVFKAKFYTIGNQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0946 331 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 157 - -
Alju13g0946 331 MobiDBLite consensus disorder prediction 1 20 - -
Alju13g0946 331 ProSiteProfiles Protein kinase domain profile. 1 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0946 331 Gene3D Transferase(Phosphotransferase) domain 1 150 310 - -
Alju13g0946 331 Pfam Protein kinase domain 157 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0946 331 SUPERFAMILY Protein kinase-like (PK-like) 158 315 IPR011009 -
Alju13g0946 331 SMART serkin_6 45 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0946 Alju-ChrAlju13 27885141 27886880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0946 158 317 Receptor kinase-like Gene Family AT5G38280 38.462 6.78e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Alju13g0946 Pkinase 1.8e-12 CL0016