Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0945 ATGTCGGAACCAGGGGCATCGTTATTGATCTCTGTCTGCCTAGTTGCTGGTGTTGGCTTGATAATAGTTACAGCCAGGGTATGTAAAAAATCAGTGGACAGATATTGCCAGAAAAATACAGGAGTGGTGAACCAAAGGAGTGAAACTTCAGAAGTGGTAGAAACGGCTGGTGTAATGAACACAGATGTGTTAGAATACAATATGGATGAGTTTCTGAATGATATTGAAAAAGAGAAGCCAATCAAGTTCACTTCAGATCAACTACTGCATGCAACTTATAACTATTCCTACAAGTTGGGGTCAGGAGGCTTTGGAGCAGTCTATAGAGGGACTTTGGTTGATGGAACCATTGTGGCTGTGAAGGTTCTAAATGATGAGAGTTCAGATGAGAGAATAAAGGAAACGTTCATGGCAGAAGTAGGCACAATTGGAAGAGTTCATCATTTGAATTTGGTTCGCCTTTTTGGGTTTTGCTTTGAAAGGAATATGACAGCTCTAGTTTATGAGTACATGAGCAATGGCTCTCTTGATAAATATTTGTTTCGTGAAAACAATATCTTAACATTTGAAAAGCTTCATGAGATTTCAGTTGGAACGGCTAAAGGCATGGCTTACTTGCATGAAGAGTGCCAACGGAGAATCATCCACTATGACATAAAGCCAGGAAACATCCTATTGGACCATAACTTTTGCCCTAAAGTTGCTGACTTCAGTTTGGCCAAACTTTGTAATAGGGAAAAATCTCATATTACCATGACCAGAGTAAGAGGGACACCTGGTTATGCTGCGCCAGAACTATGGTTTCCATTTTCTGTAACTCACAAGTGCGATGTTTACAGCTTTGGAATGTTGTTATTTGAACTCATAGGTAGGAGAAGGAACCATGACATGAACCTTCCAGAAAGTCAACAATGGTTTCCAAAACAGGTTTGGATAAAATTTAACATGGGAGAGATAGAAAAGTTGACAATAGATTGTGGTATATCGGAAAAAGATAAAGAAATAGTAGAAAGAATGGCAAGAATAGCTCTTTGGTGTGTTCAGTACAAGCCAGAATTGAGACCAGAAATGAGTGTTGTGGTGAAGATGTTGGAGGGTTTGGTAAATATCCCAAACCCTTCAAACCCTTTTCGGCATTTGATGGAAGAAGATCACCTTAAGCATCATGTCGATGCAGCACAAATCGATATTGATAGTACGTATTGA 1206 0.3947 MSEPGASLLISVCLVAGVGLIIVTARVCKKSVDRYCQKNTGVVNQRSETSEVVETAGVMNTDVLEYNMDEFLNDIEKEKPIKFTSDQLLHATYNYSYKLGSGGFGAVYRGTLVDGTIVAVKVLNDESSDERIKETFMAEVGTIGRVHHLNLVRLFGFCFERNMTALVYEYMSNGSLDKYLFRENNILTFEKLHEISVGTAKGMAYLHEECQRRIIHYDIKPGNILLDHNFCPKVADFSLAKLCNREKSHITMTRVRGTPGYAAPELWFPFSVTHKCDVYSFGMLLFELIGRRRNHDMNLPESQQWFPKQVWIKFNMGEIEKLTIDCGISEKDKEIVERMARIALWCVQYKPELRPEMSVVVKMLEGLVNIPNPSNPFRHLMEEDHLKHHVDAAQIDIDSTY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0945 401 FunFam serine/threonine-protein kinase PBS1-like 64 170 - -
Alju13g0945 401 PANTHER OS07G0415500 PROTEIN 54 376 - -
Alju13g0945 401 SUPERFAMILY Protein kinase-like (PK-like) 83 365 IPR011009 -
Alju13g0945 401 ProSitePatterns Protein kinases ATP-binding region signature. 99 121 IPR017441 GO:0005524
Alju13g0945 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Alju13g0945 401 SMART serkin_6 93 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0945 401 Gene3D Transferase(Phosphotransferase) domain 1 171 379 - -
Alju13g0945 401 Gene3D Phosphorylase Kinase; domain 1 67 170 - -
Alju13g0945 401 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0945 401 FunFam Putative receptor-like protein kinase 171 372 - -
Alju13g0945 401 Pfam Protein tyrosine and serine/threonine kinase 97 364 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0945 Alju-ChrAlju13 27844813 27846146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0945 82 383 Receptor kinase-like Gene Family AT5G38280 41.613 3.21e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Alju13g0945 PK_Tyr_Ser-Thr 2.4e-48 CL0016