Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0911 ATGCGGGATAGTGAGAAGAATGCAAATAGCAGAGGATCAAGAAAATACAAGAATTCAAGCGCGCAAACTGAGTTAAAGCCATGCTCATCATTGAGATTCAAAACCAGTAGCCCAAAATCCCAAGTGAAAAAGCATAAATTAAAATCAAAATCTCACGCACATAGAGTTGGTGCAAATAAATCAAGGAAGGTTGTCACTGACTCTTCTAAGGAGGACCCAGGCAGGGACTTTTCAAATAAAAACTTGATCATTGGAAAATGTCTACATAAAACCAATGGAAATCCATCACAGAAGCCCAGCACATCAAAGCCTCACGGTGAAAAAGTTTCTCTTGACTCTGAGAAAGAGGGTAAAGATGTTGATGGGGAGGTAAATATTCAGAAGCTTAAAAGGAGAAGGAGAAAAAAGAAAAGGCATAGAAATAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGGCTAAGGTATCTTCTGATTAAAATAAAGCGGGAGCAGAACCTTATTGATGCTTATTCTGGAGAAGGTTGGAAAGGTCAGAGTCAAGAGAAGATCAGGCCAGAAAAGGAGTTGCTAAGAGCTCGGAAGCAGATTTTACAATGTAAGCTTAGTATTCGTGATGCCATTCACCAGTTGGATACTCTTAGTTCGGTGGGTAGCATTGAGGGCTCTGTCATTGCTCCGGATGGATCTGTTTACCATGAACATATATTCTGTGCAAAGTGCAAATTGCGTGAAGCTTTCCCTGATAATGATATTATACTATGTGATGGCACCTGTAACCGAGCTTTTCACCAAAAATGTCTTGATCCTCCATTGGACACCGAAAATATTCCTCCTGGAGATCAGGGCTGGTTTTGTAAGTTTTGTGAATGTAAGATGGAAATACTAGAGGCAATAAATGCTCATCTTGGGACTCATTTCTCCCTGGACAGCACTTGGCAGGATGTATTCAAGGAAGAAGCTTCCATCCCTGATGGCGATACTGGTTTACTGGATCCAGAAGAAGAATGGCCATCAGATGAATCTGATGATGATGATTATAATCCTGAAAGGAGAGAGGATAGCCACAATATCAGTGCAGAGGATATTGATGGTGATGCATCTGATGATTCAGGCAGTTCTACCAGTCTATGGAATTCAGATTATGGATATTCTCCAGGAATAGGAAAAGAAAGCAATGACCATGAATTTTTCTCTGTGAATAGTTGCATAGATTCTGATGAATCGGGAGAGATAGCATGTGGCCGGAGGCAGCGAAAAGCAGTTGACTACAAGAAACTCTATGATGAAATGTTTGGGAAAGATGCTCCTGCACTTGAACAAGTTAGTGAAGATGAAGACTGGGGTCCAGGCAGAAAAAAGCGAAGAGAAAAAGAATCTGACGCTGCTAATACTCTGATGACCCTCCATGAAAGTGAGAACAAATCTTCCAACAATGAACAGAATGTGATAACGGAATTTTCTTCAGACTTACAAAGTAAAAGGCCTTGTTTCAGGCTTCCACGCCATGCAGTTGAGAAGCTTCGCGAGGCATTCTCCGAGAATGAACTTCCTCCAAGATCCGTGAAGGAGAGTCTTTCGAAAGAGTTGGGACTAGATGCTGATAAGGTTAGCAAATGGTTCAAAAATGCACGTTACTTGGCTCTAAGAGCCAGAAAGCAAGCAGAAGAACAGACTCAAAGCATCACTTCTAGAAGCTCAAAAGATTCTAATCTACAAAACCCAGAGATAGAGGATTTGACACCAAAGGAAACCTCAAAAGTAACGTTGACTGATCCCCAGACAAATGCTGCAAATGACAGCCGCAAAAAGCGCTTAAAGTCATCCCGCGGTAAGCCTTTGAAGAAAAGGAAACAAGAGATATCTCCACCTCAATCAAAACCAAATGGCAAGAAGGACTTGGTTGAGTTCAGTGACGATGTTAGCTTGAAGAAACTGTTGAAAGCAAAAAGAAAGAAAGTAACTTATAAATTTGAGGGAGACTCGGAAGCAGCAGAGTTAGAATTTGAAAGACTTAGCAAACTGAAGAGTAGAATAGACAGTATCAGGCAAAAAGTTCTTGCAATTAAAAGTCACACAGCCAAAGCTTCAGAAGGATCCAAATCCAAAGAGCCATTGGTTATATATGTACCCCTAGCTGAGTTAAAGGAAAAAATTTGA 2163 0.4096 MRDSEKNANSRGSRKYKNSSAQTELKPCSSLRFKTSSPKSQVKKHKLKSKSHAHRVGANKSRKVVTDSSKEDPGRDFSNKNLIIGKCLHKTNGNPSQKPSTSKPHGEKVSLDSEKEGKDVDGEVNIQKLKRRRRKKKRHRNNVDLDDASRLQRRLRYLLIKIKREQNLIDAYSGEGWKGQSQEKIRPEKELLRARKQILQCKLSIRDAIHQLDTLSSVGSIEGSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEAINAHLGTHFSLDSTWQDVFKEEASIPDGDTGLLDPEEEWPSDESDDDDYNPERREDSHNISAEDIDGDASDDSGSSTSLWNSDYGYSPGIGKESNDHEFFSVNSCIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPALEQVSEDEDWGPGRKKRREKESDAANTLMTLHESENKSSNNEQNVITEFSSDLQSKRPCFRLPRHAVEKLREAFSENELPPRSVKESLSKELGLDADKVSKWFKNARYLALRARKQAEEQTQSITSRSSKDSNLQNPEIEDLTPKETSKVTLTDPQTNAANDSRKKRLKSSRGKPLKKRKQEISPPQSKPNGKKDLVEFSDDVSLKKLLKAKRKKVTYKFEGDSEAAELEFERLSKLKSRIDSIRQKVLAIKSHTAKASEGSKSKEPLVIYVPLAELKEKI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0911 720 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 39 719 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 439 465 - -
Alju13g0911 720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 287 IPR013083 -
Alju13g0911 720 ProSiteProfiles Zinc finger PHD-type profile. 236 293 IPR019787 -
Alju13g0911 720 FunFam pathogenesis-related homeodomain protein 494 558 - -
Alju13g0911 720 CDD PHD_PRHA_like 238 290 IPR045876 -
Alju13g0911 720 FunFam pathogenesis-related homeodomain protein-like 230 290 - -
Alju13g0911 720 ProSitePatterns Zinc finger PHD-type signature. 239 290 IPR019786 -
Alju13g0911 720 MobiDBLite consensus disorder prediction 1 122 - -
Alju13g0911 720 SUPERFAMILY FYVE/PHD zinc finger 230 296 IPR011011 -
Alju13g0911 720 Gene3D - 494 563 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 60 77 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 466 482 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 555 580 - -
Alju13g0911 720 SMART HOX_1 494 556 IPR001356 GO:0003677
Alju13g0911 720 MobiDBLite consensus disorder prediction 553 636 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 350 364 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 13 37 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 105 122 - -
Alju13g0911 720 Pfam PHD-finger 238 293 IPR019787 -
Alju13g0911 720 MobiDBLite consensus disorder prediction 38 59 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 439 482 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 90 104 - -
Alju13g0911 720 Pfam Homeodomain 503 547 IPR001356 GO:0003677
Alju13g0911 720 CDD homeodomain 495 555 IPR001356 GO:0003677
Alju13g0911 720 SUPERFAMILY Homeodomain-like 494 559 IPR009057 -
Alju13g0911 720 ProSiteProfiles 'Homeobox' domain profile. 492 552 IPR001356 GO:0003677
Alju13g0911 720 SMART PHD_3 238 291 IPR001965 -
Alju13g0911 720 MobiDBLite consensus disorder prediction 330 349 - -
Alju13g0911 720 MobiDBLite consensus disorder prediction 323 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0911 Alju-ChrAlju13 27152072 27158189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0911 141 554 Homeobox Transcription Factor Family AT4G29940 58.782 2.24e-158 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Alju13g0911 PHD 2.5e-11 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0911 13 27152072 27158189 Alju13g0911 13 27152072 27158189 ECH