Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0897 ATGGTTTCTACTACTAGAAGACTTGGACTCGTGAGTCGTAAATCGGGGATTCTTTGTTTTCCACAAATGAGTTACTTGAAGGGTTCACCTCGCCGTCAAAACGACCTAGAGGCGGGGAATAGTCGCTCCAGCGACTTTGATGATGGAGAAGGTTCGTCCGATCCGTTTGATATTTCCAGTACTAAAAATGCTTCTATTGAACGGCTCAGGCGGTGGAGGCAAGCTGCGCTTGTTCTTAATGCTTCTCGTCGATTCCGTTATACCTTGGACCTGAAAAAAGAGGAGGAGAAGCAGCAAACATTGAGGAAGATTAGGGCGCATGCACAAGCCATTAGGGCTGCATATCTTTTCAAAAAAGCTGCTGTGCCACCTGTGAATGGGACTCCAGCACCACCTCCAGCTGCTCCTGGTGACTTCCCAATCGGACAAGAGCAGCTTGCTTCAATTTCAAGGGATCATAACAGTGATGTCCTGCAGCAATATGGAGGGGTTAGAGGCCTTGCAGAATCGTTGAAAACCAATGTAGAGAAGGGGATTCATGGTGATGATGGTGACTTAGTGAAGCGGAGGAATGCCTATGGATCAAACAATTATCCTCGAAAGAAGCCCAGGAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCCTGGTTATATTAATGGTTGCGGCGGTGGCTTCATTGGCACTAGGAATAAAATCTGAGGGTATCAAGGAAGGATGGTATGATGGAGGGAGCATTGCATTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTTTAAGCAGTCTCTTCAGTTTCGTGATTTAAATGAAGAGAAGAGAAATATACATCTAGAGGTTATAAGAAATGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTCGGTGATGTTGTACCTCTGAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTCACTCTCTAGCAATTGATGAATCAAGTATGACTGGCGAGAGCAAGACTGTTCACAAGGACTCAAAGAATCCCTTTTTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTTACAGGTGTTGGTATTAATACTGAGTGGGGGCTTTTAATGGCTAGTATATCTGAGGACAATGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGTGTCGCCACCTTTATTGGTATCGTTGGACTAACTGTGGCTGCTGTTGTTCTGGTTGTGCTACTGGTCAGATATTTTACTGGGCATACTGAAAAATCAGATGGAAGCCCTCAGTTTAAGGCGGGCCATACAAAATTTGGTACTGCTATTAATGGAGCAATTAAGATAATCACAGTTGCCGTCACCATTGTAGTGGTTGCTGTACCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCGGCCTGTGAGACAATGGGTTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACTTTGAATAAGATGACTGTGACAGAGGCTTACATTGGGGGGAAGAAGACTGATCCTCCTCACAACAAATCTGAGCTCTCTGATATGTACTGCTCTTTACTTGTTGAAGGCGTTGCACAAAACACCAATGGCAGTGTTTATGTATCTGAGGGTGGTAACGATGTCGAGGTCTCTGGATCACCGACAGAAAAGGCAATTTTGAACTGGGGAATTCAGCTGGGGATGAATTTTGAGGCCGTCAGATCAGAGTCATCAATTATACATGTCTTTCCATTCAATTCGGAGAAAAAACGTGGGGGAGTCGCAGTGAGGAAGCCTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTGTTGTCCTGTTGTACAGCATATTTGGATGCACAGAACCAGTCAGTAGAGATGGATGAAGAGAAGATGACATATTTTAAAAAAGCTATTGAAGACATGGCTGCTGAAAGCCTTCGCTGTGTTGCCATTGCATATAGATTATATGAAACAAAGAAAGTTCCAACTACTGAAGAAGAACTTGCTCGCTGGTCATTACCTGAGGATGATCTTGTTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTCAAGAATGCAGTGCAACTTTGCCAAAAAGCTGGAGTGAAGGTGCGAATGGTCACCGGGGACAATGTACAAACTGCAAAAGCAATTGCTTTGGAATGTGGAATACTCGGTTCATCTGCAGATGAGCGAAACATTATTGAAGGCAAAAGATTTCGGGAGTTGTCAGACTCAGAGAGAGAGGAAATTGCGGAAAGGATAACGGTTATGGGGCGATCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGTCTTGAGAAAGAAGGGGCACGTTGTTGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCACTGCATGAGGCTGATATAGGTCTTGCAATGGGTATCCAAGGGACAGAAGTTGCTAAAGAGAGCTCTGATATCATAATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTTAGATGGGGGCGGTCTGTATATGCAAATATCCAGAAATTTATCCAGTTTCAACTTACAGTAAATGTGGCAGCTCTTGTAATTAACGTTGTTGCTGCAGTTTCTTCTGGTGATGTCCCACTGAATACAGTCCAGCTTCTCTGGGTAAATCTGATCATGGATACACTTGGAGCACTAGCCTTGGCAACGGAACCACCAACTGATCACCTAATGGATCGGTCTCCTGTGGGCAGAAGGGAACCTCTCATAACAAATATCATGTGGAGGAATTTGCTCATACAAGCAACATACCAAATATCTGTTTTGCTTGTACTCAATTTCCGAGGAAGGAGCATACTGGGTCTAAAGCATGAACAGTTCACCCATTCTCTCAAAGTGAAGAACACTCTAATATTTAATGCGTTTGTGTTCTGTCAAATCTTTAATGAATTCAATGCTCGAAAGCCAGATGAGTACAACATCTTCAAGGGAGTCACAAGAAATTACCTCTTTATGGGGATTGTGGGAATAACTCTTCTGCTTCAGATTATCATCATTGAATTTCTGGGAAAATTCACCTCGACAGTCAGGCTTAATTGGAAGATATGGATCATTTCCGTCGTCATTGGATTAATCAGCTGGCCTCTTGCTGCGGCTGGGAAGTTGATACCTGTGCCTGAAACCCCCCTTTCCGAGTTTTTTATGAGATGTTTTCGGCGACGATAA 3273 0.4351 MVSTTRRLGLVSRKSGILCFPQMSYLKGSPRRQNDLEAGNSRSSDFDDGEGSSDPFDISSTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKQQTLRKIRAHAQAIRAAYLFKKAAVPPVNGTPAPPPAAPGDFPIGQEQLASISRDHNSDVLQQYGGVRGLAESLKTNVEKGIHGDDGDLVKRRNAYGSNNYPRKKPRSFLMFVWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDFKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVVPLNIGDQVPADGILITGHSLAIDESSMTGESKTVHKDSKNPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLTVAAVVLVVLLVRYFTGHTEKSDGSPQFKAGHTKFGTAINGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNKMTVTEAYIGGKKTDPPHNKSELSDMYCSLLVEGVAQNTNGSVYVSEGGNDVEVSGSPTEKAILNWGIQLGMNFEAVRSESSIIHVFPFNSEKKRGGVAVRKPDSQVHIHWKGAAEIVLSCCTAYLDAQNQSVEMDEEKMTYFKKAIEDMAAESLRCVAIAYRLYETKKVPTTEEELARWSLPEDDLVLLAIVGLKDPCRPGVKNAVQLCQKAGVKVRMVTGDNVQTAKAIALECGILGSSADERNIIEGKRFRELSDSEREEIAERITVMGRSSPNDKLLLVQVLRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQATYQISVLLVLNFRGRSILGLKHEQFTHSLKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTRNYLFMGIVGITLLLQIIIIEFLGKFTSTVRLNWKIWIISVVIGLISWPLAAAGKLIPVPETPLSEFFMRCFRRR 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0897 1090 FunFam Calcium-transporting ATPase 259 380 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 834 846 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Alju13g0897 1090 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Alju13g0897 1090 FunFam Calcium-transporting ATPase 64 120 - -
Alju13g0897 1090 SFLD C1.7: P-type atpase like 486 862 - -
Alju13g0897 1090 Gene3D - 64 119 - -
Alju13g0897 1090 SUPERFAMILY Calcium ATPase, transduction domain A 282 377 IPR008250 -
Alju13g0897 1090 Pfam E1-E2 ATPase 282 482 - -
Alju13g0897 1090 SUPERFAMILY HAD-like 502 915 IPR036412 -
Alju13g0897 1090 Gene3D - 501 855 IPR023214 -
Alju13g0897 1090 SMART Cation_ATPase_N_a_2 160 234 IPR004014 -
Alju13g0897 1090 FunFam Calcium-transporting ATPase 514 712 - -
Alju13g0897 1090 SUPERFAMILY Calcium ATPase, transmembrane domain M 161 1073 IPR023298 -
Alju13g0897 1090 FunFam Calcium-transporting ATPase 212 268 - -
Alju13g0897 1090 MobiDBLite consensus disorder prediction 29 59 - -
Alju13g0897 1090 FunFam Calcium-transporting ATPase 9 plasma membrane-type 358 528 - -
Alju13g0897 1090 Gene3D - 187 380 - -
Alju13g0897 1090 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Alju13g0897 1090 PRINTS H+-transporting ATPase (proton pump) signature 657 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0897 1090 PRINTS H+-transporting ATPase (proton pump) signature 810 826 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0897 1090 PRINTS H+-transporting ATPase (proton pump) signature 842 867 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0897 1090 Pfam Ca2+-ATPase N terminal autoinhibitory domain 53 96 IPR024750 GO:0005516
Alju13g0897 1090 CDD P-type_ATPase_Ca_PMCA-like 188 943 - -
Alju13g0897 1090 Pfam Cation transporting ATPase, C-terminus 895 1072 IPR006068 -
Alju13g0897 1090 Gene3D - 514 712 IPR023299 GO:0000166
Alju13g0897 1090 NCBIfam calcium-translocating P-type ATPase, PMCA-type 154 1074 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju13g0897 1090 SFLD p-type atpase 486 862 IPR044492 -
Alju13g0897 1090 Gene3D - 212 1063 - -
Alju13g0897 1090 FunFam Calcium-transporting ATPase 827 1076 - -
Alju13g0897 1090 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 510 717 IPR023299 GO:0000166
Alju13g0897 1090 FunFam Calcium-transporting ATPase 706 855 - -
Alju13g0897 1090 PANTHER CATION TRANSPORTING ATPASE 105 1074 - -
Alju13g0897 1090 Pfam haloacid dehalogenase-like hydrolase 501 824 - -
Alju13g0897 1090 Pfam Cation transporter/ATPase, N-terminus 162 229 IPR004014 -
Alju13g0897 1090 NCBIfam HAD-IC family P-type ATPase 249 417 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0897 1090 NCBIfam HAD-IC family P-type ATPase 444 537 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0897 1090 NCBIfam HAD-IC family P-type ATPase 776 890 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0897 Alju-ChrAlju13 26870752 26891867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0897 26 1083 Primary Pumps ATPases AT4G29900 74.224 0.0 1603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0897 13 26870752 26891867 Alju13g0897 13 26870752 26891867 ECH