Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0884 ATGCTGAGTGACATTCTTCCTAAAGATCTCATGGAGGAGATCATGGTGAGGCTACCGGTAAAATCCTTGCTTCGATTCAAATGTGTAAACAAATCCTGGAATTCTCTAATCACTGACTATTCTTTTATCACCAAACATTTTGAATGGTGTAATTCATTTGGTAAGAATCGCCGCCTCAGGCTCGTCTACCGACAGTTCAGTCGCGATAATCAGCCACCCTCCATATCATTGATTTCTAATAGAGATCGACCCTATGAGATCCAAAACTTAGAATTGCCTTTCCATAAGAACAATTTGCAACGTATGTTTGTTTTTGGTCAATGTAACGGGATTTTCTGTCTCAGTGGGGACTATGAAGATGTTCGACGCTTAATTTTGTGGAACCCAGCAACAAAAGAGGTGAAGGCTATTCCTACATCTCAATGGCAGCCTAAAGGCCCGTATTGGGCTGCTTATGGATTGGGGTTTGATTCCATGACAAAGGATTACAAGATTGTTCAATTTCCTAAGGAAGAAGAAGGACACCTACTAGTTCAAATTTACAGTCTCAGTACTGATTCTTGGAGAAAACTTGATGTTGATATCTCCATTTATAAATTTCGTCATTCACCCATGGGTCCTTATCTGAATGGTGCTTATCACTGGTTAGCTAGTAGCCGTAATGATATTGATAAGTTTATAGTGAGTTTTCATTTTAGCAAAGAAACTTTTAGGATTGTCCAAAGTCCTCCCGGGATTACTTCCTCTCGTGCCGAACATAATGTTCTTGCTGTAGTGGATGAGAGTCTTGCTTGGGTTGTTACACAAGTCTTGATTGAGGTTTGTCTTGAGATTTGGGTTATCAATGAGCACGGTGCTGAGAATAGTTGGACTAAGAAGCTTGAGATTCGACCATTCCCTTACTCTTACTCTTACTCTTGGTATATCTTACAGTTTTGGGGAGATTATGAGATTATTGTTTATGATGACATTAATTGTCAATTGATTTCATATAATTTTCGGAATCAACGGATAGAGAGGTTGAAAGATGACTTTCGAACGATGATGGATTATGTGGAAAGTTTGTTTCCTTTAGGAGGAGGCAACTGA 1089 0.3921 MLSDILPKDLMEEIMVRLPVKSLLRFKCVNKSWNSLITDYSFITKHFEWCNSFGKNRRLRLVYRQFSRDNQPPSISLISNRDRPYEIQNLELPFHKNNLQRMFVFGQCNGIFCLSGDYEDVRRLILWNPATKEVKAIPTSQWQPKGPYWAAYGLGFDSMTKDYKIVQFPKEEEGHLLVQIYSLSTDSWRKLDVDISIYKFRHSPMGPYLNGAYHWLASSRNDIDKFIVSFHFSKETFRIVQSPPGITSSRAEHNVLAVVDESLAWVVTQVLIEVCLEIWVINEHGAENSWTKKLEIRPFPYSYSYSWYILQFWGDYEIIVYDDINCQLISYNFRNQRIERLKDDFRTMMDYVESLFPLGGGN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0884 362 Gene3D - 4 42 - -
Alju13g0884 362 PANTHER OS09G0372900 PROTEIN-RELATED 6 312 - -
Alju13g0884 362 SMART fbox_2 6 45 IPR001810 GO:0005515
Alju13g0884 362 SUPERFAMILY F-box domain 5 327 IPR036047 GO:0005515
Alju13g0884 362 CDD F-box_AtFBW1-like 4 42 - -
Alju13g0884 362 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Alju13g0884 362 SUPERFAMILY Galactose oxidase, central domain 115 309 IPR011043 -
Alju13g0884 362 Pfam F-box associated 209 299 IPR006527 -
Alju13g0884 362 Pfam F-box domain 6 41 IPR001810 GO:0005515
Alju13g0884 362 NCBIfam F-box protein interaction domain 106 334 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0884 Alju-ChrAlju13 26678437 26679525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0884 179 300 Carbohydrate Esterase AT1G25141 29.365 1.89e-07 49.7