LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g0882	ATGCTGAGTGACATTCTTCCTAAAGATCTCATGGAGGAGATCATGGTGAGGCTACCGGTAAAATCCTTGCTTCGATTCAAATGTGTAAACAAATCCTGGAATTCTCTAATCACTGACTATTCTTTTATCACCAAACATTTTGAATGGTCTAATTCATTTGGTAAGAATCGCCGCCTTAGGCTCATCTACCGAGAGTTCAGTCGCGATAATCAGCCACCCTCCATATCCTTGATTTCTAATAGAGATCGACCCTATGAGATCCAAAACTTAGAATTGCCTTTCCATAAGAACAATTTGCGACGTATGTTTGTTTTAGGTCAATGTAACGGGATTTTCTGTCTCAGTGGGGACTATGAAGATGTTCGACGCTTAATTTTGTGGAACCCAGCAACAAAAGAGGTGAAGGCTATTCCTACATCTCAATGGCAGCCTAAAGGCCCGTATTGGGCTGCTTATGGATTGGGGTTTGATTCCATGACAAATGATTACAAGATTGTTCAATTTCCTAAGGAAGAAGAAGGACACCTACTAGTTCAAATTTACAGTCTCAGTACTGATTCTTGGAGAAAACTAGATGTTGATATCTCCATTTATAAATTTCGTCATTCACCCATGGGTCCTTATCTGAATGGTGCTTATCACTGGTTAGCTAGTAGCCGTGATGATATTGATAAGTTTATAGTGAGTTTTCATTTTAGCAAAGAAACTTTTAGGATTGTCCAAAGTCCTCCCGGGATTACTTCCTCTCGTGCCGAACATAATGTTCTTGCTGTAGTGGATGAGAGTCTTGCTTGGGTTGTTACACAAGTCTTGATTGAGGTTTGTCTTGAGATTTGGGTGATCAATGAGCACGGTGCTGAGAATAGTTGGACTAAGAAGCTTGAGATTCGACCATTCCCTTACTCTTATTCTTACTCTTGGTATATCTTACAGTTTTGGGGAGATTATGAGATTATTGTTTATGATGACATTAATTGTCAATTGATTTCATATAATTTTTGGAATCAACGGATAGAGAGGTTGAAAGATGACTTTCGAACGATGATGGATTTTGTGGAAAGTTTGTTTCCTTTACGAGGAGGCAAGTGA	1089	0.3912	MLSDILPKDLMEEIMVRLPVKSLLRFKCVNKSWNSLITDYSFITKHFEWSNSFGKNRRLRLIYREFSRDNQPPSISLISNRDRPYEIQNLELPFHKNNLRRMFVLGQCNGIFCLSGDYEDVRRLILWNPATKEVKAIPTSQWQPKGPYWAAYGLGFDSMTNDYKIVQFPKEEEGHLLVQIYSLSTDSWRKLDVDISIYKFRHSPMGPYLNGAYHWLASSRDDIDKFIVSFHFSKETFRIVQSPPGITSSRAEHNVLAVVDESLAWVVTQVLIEVCLEIWVINEHGAENSWTKKLEIRPFPYSYSYSWYILQFWGDYEIIVYDDINCQLISYNFWNQRIERLKDDFRTMMDFVESLFPLRGGK	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g0882	362	NCBIfam	F-box protein interaction domain	107	320	IPR017451	-
	Alju13g0882	362	SMART	fbox_2	6	45	IPR001810	GO:0005515
	Alju13g0882	362	Pfam	F-box associated	209	299	IPR006527	-
	Alju13g0882	362	Gene3D	-	4	42	-	-
	Alju13g0882	362	CDD	F-box_AtFBW1-like	4	42	-	-
	Alju13g0882	362	ProSiteProfiles	F-box domain profile.	1	46	IPR001810	GO:0005515
	Alju13g0882	362	Pfam	F-box domain	6	41	IPR001810	GO:0005515
	Alju13g0882	362	SUPERFAMILY	F-box domain	5	326	IPR036047	GO:0005515
	Alju13g0882	362	PANTHER	OS09G0372900 PROTEIN-RELATED	6	312	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g0882	Alju-ChrAlju13	26623630	26624718	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g0882	179	300	Carbohydrate Esterase	AT1G25141	29.365	1.25e-07	50.4