Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0876 ATGGAGCCTTTAGTATTCAAGGGAAGGCTTAAGGAGGGAAAAACTTCTTCATGTGGAGATGAAGGCTTGGTCATTTCCATCAAGAGAATGAATTTCAATAGCATTCAACTTGCAGAATTGCAGATGTACAATGCCAAGTTATCAGACTTTGGTTTTGAGAAATTTGGCCTTTCATCTGATCAGGCTCATTTATCATCATCAAAACAAGTTCACGGAACTTGTGATGATGCTTGTTATGCTGCTCCTGAGAACATTACTACAGGACATGCAAGTGTGAAGAGTGATGTGTATGGATTTGGCATAGTCTTAGTGGAGATTCTGAGTAGGAAAAGAATAGCTGATACAATAATGAAGCAATGTGGGCAAAACCAGACATTATTATTGGTGGATTGGCTCAAATCAAACGTGTTGATGAGCAGAATGAAAATGAGAAGCTCATTAATGGACACAAGGTTAAGAGGCAAGTACCCATCAAAGTTAGCACTACGAGTGGCTCAACTTGCTCTCAATTGCATCCAAACTCATCCAAATTAA 534 0.3914 MEPLVFKGRLKEGKTSSCGDEGLVISIKRMNFNSIQLAELQMYNAKLSDFGFEKFGLSSDQAHLSSSKQVHGTCDDACYAAPENITTGHASVKSDVYGFGIVLVEILSRKRIADTIMKQCGQNQTLLLVDWLKSNVLMSRMKMRSSLMDTRLRGKYPSKLALRVAQLALNCIQTHPN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0876 177 SUPERFAMILY Protein kinase-like (PK-like) 43 176 IPR011009 -
Alju13g0876 177 Pfam Protein tyrosine and serine/threonine kinase 45 117 IPR001245 GO:0004672|GO:0006468
Alju13g0876 177 Gene3D Transferase(Phosphotransferase) domain 1 31 177 - -
Alju13g0876 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0876 177 PANTHER OS01G0588500 PROTEIN-RELATED 41 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0876 Alju-ChrAlju13 26290062 26295550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0876 43 173 Glycoside Hydrolase AT3G07070 38.168 3.54e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju13g0876 PK_Tyr_Ser-Thr 2.3e-09 CL0016